RNA–Protein interactions for RNA: ENST00000439602.6

RPS18-230, Transcript of ribosomal protein S18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS18, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-230ENST00000439602 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.711e-323■□□□□ 10.8
RPS18-230ENST00000439602 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.021e-323■■■□□ 18
RPS18-230ENST00000439602 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.133e-71■■■■□ 21.3
RPS18-230ENST00000439602 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.433e-54■□□□□ 10
RPS18-230ENST00000439602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.283e-45■■■■■ 32.6
RPS18-230ENST00000439602 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.48e-38■□□□□ 9.8
RPS18-230ENST00000439602 NCBP2P52298 156 aaKnown RBP eCLIP10.65□□□□□ -0.77e-29■■■■□ 23.8
RPS18-230ENST00000439602 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.272e-26■■□□□ 12.6
RPS18-230ENST00000439602 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.915e-25■□□□□ 8.1
RPS18-230ENST00000439602 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.18e-23■□□□□ 11
RPS18-230ENST00000439602 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.943e-21■■■■■ 65.8
RPS18-230ENST00000439602 LARP4Q71RC2 724 aaKnown RBP eCLIP10.65□□□□□ -0.71e-20■■□□□ 13.8
RPS18-230ENST00000439602 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.161e-19■■■■□ 22.7
RPS18-230ENST00000439602 EFTUD2Q15029 972 aaKnown RBP eCLIP10.93□□□□□ -0.663e-19■■■■■ 79.2
RPS18-230ENST00000439602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.98□□□□□ -0.655e-19■□□□□ 11.3
RPS18-230ENST00000439602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.89□□□□□ -0.354e-18■□□□□ 9.2
RPS18-230ENST00000439602 RPS3P23396 243 aaKnown RBP eCLIP11.28□□□□□ -0.66e-14■□□□□ 9.7
RPS18-230ENST00000439602 DDX3XO00571 662 aaKnown RBP eCLIP11.81□□□□□ -0.527e-13■■□□□ 11.9
RPS18-230ENST00000439602 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.241e-12■■■■■ 28.4
RPS18-230ENST00000439602 SF3A3Q12874 501 aaKnown RBP eCLIP10.05□□□□□ -0.81e-12■■■■■ 39.1
RPS18-230ENST00000439602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.84e-12■■□□□ 13.1
RPS18-230ENST00000439602 SMNDC1O75940 238 aaKnown RBP eCLIP10.54□□□□□ -0.727e-12■■■□□ 17
RPS18-230ENST00000439602 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.632e-11■■■■■ 51.6
RPS18-230ENST00000439602 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.266e-11■■■■□ 26.1
RPS18-230ENST00000439602 SF3B4Q15427 424 aaKnown RBP eCLIP10.73□□□□□ -0.698e-11■■■■□ 19.4
RPS18-230ENST00000439602 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.331e-9■■■■■ 28.9
RPS18-230ENST00000439602 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.351e-8■■□□□ 13.1
RPS18-230ENST00000439602 HNRNPMP52272 730 aaKnown RBP eCLIP18.59■□□□□ 0.573e-8■■■■□ 22.6
RPS18-230ENST00000439602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.434e-8■■■■■ 32.6
RPS18-230ENST00000439602 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.627e-8■□□□□ 9.9
RPS18-230ENST00000439602 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.048e-8■■■□□ 17.7
RPS18-230ENST00000439602 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.591e-7■■■■■ 45.1
RPS18-230ENST00000439602 RBM22Q9NW64 420 aaKnown RBP eCLIP11.67□□□□□ -0.541e-7■■■■■ 30.3
RPS18-230ENST00000439602 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.334e-7■■□□□ 12.2
RPS18-230ENST00000439602 AKAP1Q92667 903 aaKnown RBP eCLIP10.35□□□□□ -0.755e-7■■□□□ 12.5
RPS18-230ENST00000439602 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.258e-7■■■■□ 19.7
RPS18-230ENST00000439602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■□□□□ 9.9
RPS18-230ENST00000439602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.678e-6■■■□□ 14.7
RPS18-230ENST00000439602 CPSF6Q16630 551 aaKnown RBP eCLIP10.84□□□□□ -0.679e-6■■□□□ 12.5
Retrieved 39 of 39 RNA–protein pairs in 8 ms