RNA–Protein interactions for RNA: ENST00000439360.5

AC006001.2-202, humanhuman

TSL 3 BASIC

Gene AC006001.2, Length 508 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-202ENST00000439360 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
AC006001.2-202ENST00000439360 ABCC9O60706 1549 aa27.75■■■□□ 2.03
AC006001.2-202ENST00000439360 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
AC006001.2-202ENST00000439360 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
AC006001.2-202ENST00000439360 NACADO15069 1562 aa26.16■■□□□ 1.78
AC006001.2-202ENST00000439360 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
AC006001.2-202ENST00000439360 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
AC006001.2-202ENST00000439360 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
AC006001.2-202ENST00000439360 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
AC006001.2-202ENST00000439360 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
AC006001.2-202ENST00000439360 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
AC006001.2-202ENST00000439360 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
AC006001.2-202ENST00000439360 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
AC006001.2-202ENST00000439360 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
AC006001.2-202ENST00000439360 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
AC006001.2-202ENST00000439360 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
AC006001.2-202ENST00000439360 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
AC006001.2-202ENST00000439360 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
AC006001.2-202ENST00000439360 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
AC006001.2-202ENST00000439360 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
AC006001.2-202ENST00000439360 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
AC006001.2-202ENST00000439360 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
AC006001.2-202ENST00000439360 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
AC006001.2-202ENST00000439360 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
AC006001.2-202ENST00000439360 CUX2O14529 1486 aa23.94■■□□□ 1.42
AC006001.2-202ENST00000439360 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
AC006001.2-202ENST00000439360 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
AC006001.2-202ENST00000439360 NESP48681 1621 aa23.84■■□□□ 1.41
AC006001.2-202ENST00000439360 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
AC006001.2-202ENST00000439360 BAZ1BQ9UIG0 1483 aaKnown RBP23.82■■□□□ 1.4
AC006001.2-202ENST00000439360 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
AC006001.2-202ENST00000439360 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
AC006001.2-202ENST00000439360 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
AC006001.2-202ENST00000439360 KIF21AQ7Z4S6 1674 aa23.56■■□□□ 1.36
AC006001.2-202ENST00000439360 WIZO95785 1651 aa23.47■■□□□ 1.35
AC006001.2-202ENST00000439360 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
AC006001.2-202ENST00000439360 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
AC006001.2-202ENST00000439360 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
AC006001.2-202ENST00000439360 WDR62O43379 1518 aa23.27■■□□□ 1.32
AC006001.2-202ENST00000439360 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
AC006001.2-202ENST00000439360 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
AC006001.2-202ENST00000439360 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
AC006001.2-202ENST00000439360 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
AC006001.2-202ENST00000439360 CFTRP13569 1480 aa23.14■■□□□ 1.29
AC006001.2-202ENST00000439360 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
AC006001.2-202ENST00000439360 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
AC006001.2-202ENST00000439360 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
AC006001.2-202ENST00000439360 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
AC006001.2-202ENST00000439360 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
AC006001.2-202ENST00000439360 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
AC006001.2-202ENST00000439360 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
AC006001.2-202ENST00000439360 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
AC006001.2-202ENST00000439360 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
AC006001.2-202ENST00000439360 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
AC006001.2-202ENST00000439360 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
AC006001.2-202ENST00000439360 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
AC006001.2-202ENST00000439360 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
AC006001.2-202ENST00000439360 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
AC006001.2-202ENST00000439360 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
AC006001.2-202ENST00000439360 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
AC006001.2-202ENST00000439360 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
AC006001.2-202ENST00000439360 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
AC006001.2-202ENST00000439360 CHD1O14646 1710 aa22.47■■□□□ 1.19
AC006001.2-202ENST00000439360 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
AC006001.2-202ENST00000439360 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
AC006001.2-202ENST00000439360 SOGA1O94964 1423 aa22.34■■□□□ 1.17
AC006001.2-202ENST00000439360 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
AC006001.2-202ENST00000439360 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
AC006001.2-202ENST00000439360 CUX1P39880 1505 aa22.31■■□□□ 1.16
AC006001.2-202ENST00000439360 FBLN2P98095 1184 aa22.29■■□□□ 1.16
AC006001.2-202ENST00000439360 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
AC006001.2-202ENST00000439360 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
AC006001.2-202ENST00000439360 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
AC006001.2-202ENST00000439360 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
AC006001.2-202ENST00000439360 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
AC006001.2-202ENST00000439360 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
AC006001.2-202ENST00000439360 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
AC006001.2-202ENST00000439360 PBRM1Q86U86 1689 aa22.14■■□□□ 1.13
AC006001.2-202ENST00000439360 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
AC006001.2-202ENST00000439360 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
AC006001.2-202ENST00000439360 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
AC006001.2-202ENST00000439360 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
AC006001.2-202ENST00000439360 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
AC006001.2-202ENST00000439360 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
AC006001.2-202ENST00000439360 TRHP20396 242 aaPredicted RBP22.02■■□□□ 1.12
AC006001.2-202ENST00000439360 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
AC006001.2-202ENST00000439360 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
AC006001.2-202ENST00000439360 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
AC006001.2-202ENST00000439360 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
AC006001.2-202ENST00000439360 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
AC006001.2-202ENST00000439360 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
AC006001.2-202ENST00000439360 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
AC006001.2-202ENST00000439360 NUP160Q12769 1436 aa21.83■■□□□ 1.09
AC006001.2-202ENST00000439360 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
AC006001.2-202ENST00000439360 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
AC006001.2-202ENST00000439360 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
AC006001.2-202ENST00000439360 PRG4Q92954 1404 aaPredicted RBP21.61■■□□□ 1.05
AC006001.2-202ENST00000439360 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
AC006001.2-202ENST00000439360 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
AC006001.2-202ENST00000439360 KIF13AQ9H1H9 1805 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms