RNA–Protein interactions for RNA: ENST00000438874.6

TSG101-202, Transcript of tumor susceptibility 101, humanhuman

TSL 1 (best)

Gene TSG101, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-202ENST00000438874 NISCHQ9Y2I1 1504 aa47.15■■■■■ 5.14
TSG101-202ENST00000438874 CCDC180Q9P1Z9 1646 aa42.28■■■■■ 4.36
TSG101-202ENST00000438874 ABCC9O60706 1549 aa42.12■■■■■ 4.33
TSG101-202ENST00000438874 RB1CC1Q8TDY2 1594 aa40.16■■■■■ 4.02
TSG101-202ENST00000438874 NACADO15069 1562 aa39.93■■■■□ 3.98
TSG101-202ENST00000438874 DCAF8L2P0C7V8 631 aa39.57■■■■□ 3.93
TSG101-202ENST00000438874 MYO15BQ96JP2 1530 aa39.47■■■■□ 3.91
TSG101-202ENST00000438874 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
TSG101-202ENST00000438874 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.88
TSG101-202ENST00000438874 PABPN1Q86U42 306 aaKnown RBP eCLIP39.19■■■■□ 3.86
TSG101-202ENST00000438874 ZCCHC6Q5VYS8 1495 aaKnown RBP39.14■■■■□ 3.86
TSG101-202ENST00000438874 BICRAQ9NZM4 1560 aa39.04■■■■□ 3.84
TSG101-202ENST00000438874 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
TSG101-202ENST00000438874 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
TSG101-202ENST00000438874 SCRIBQ14160 1630 aa38.49■■■■□ 3.75
TSG101-202ENST00000438874 CC2D2AQ9P2K1 1620 aa38.08■■■■□ 3.69
TSG101-202ENST00000438874 EIF4G1Q04637 1599 aaKnown RBP38.05■■■■□ 3.68
TSG101-202ENST00000438874 CECR2Q9BXF3 1484 aa37.95■■■■□ 3.67
TSG101-202ENST00000438874 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
TSG101-202ENST00000438874 ATAD2BQ9ULI0 1458 aa36.77■■■■□ 3.48
TSG101-202ENST00000438874 SMARCA4P51532 1647 aa36.76■■■■□ 3.48
TSG101-202ENST00000438874 SMARCA2P51531 1590 aa36.66■■■■□ 3.46
TSG101-202ENST00000438874 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
TSG101-202ENST00000438874 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
TSG101-202ENST00000438874 PEG3Q9GZU2 1588 aa36.45■■■■□ 3.43
TSG101-202ENST00000438874 BAZ1BQ9UIG0 1483 aaKnown RBP36.39■■■■□ 3.42
TSG101-202ENST00000438874 ERCC6Q03468 1493 aa36.34■■■■□ 3.41
TSG101-202ENST00000438874 MROH2BQ7Z745 1585 aa36.33■■■■□ 3.41
TSG101-202ENST00000438874 CUX2O14529 1486 aa36.3■■■■□ 3.4
TSG101-202ENST00000438874 NESP48681 1621 aa36.23■■■■□ 3.39
TSG101-202ENST00000438874 DNAJC5Q9H3Z4 198 aa36.1■■■■□ 3.37
TSG101-202ENST00000438874 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
TSG101-202ENST00000438874 THOC2Q8NI27 1593 aaKnown RBP35.89■■■■□ 3.34
TSG101-202ENST00000438874 WIZO95785 1651 aa35.88■■■■□ 3.33
TSG101-202ENST00000438874 PDS5BQ9NTI5 1447 aa35.77■■■■□ 3.32
TSG101-202ENST00000438874 KIF21AQ7Z4S6 1674 aa35.77■■■■□ 3.32
TSG101-202ENST00000438874 CADPSQ9ULU8 1353 aa35.73■■■■□ 3.31
TSG101-202ENST00000438874 RSF1Q96T23 1441 aaPredicted RBP35.62■■■■□ 3.29
TSG101-202ENST00000438874 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
TSG101-202ENST00000438874 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
TSG101-202ENST00000438874 WDR62O43379 1518 aa35.42■■■■□ 3.26
TSG101-202ENST00000438874 CFTRP13569 1480 aa35.38■■■■□ 3.25
TSG101-202ENST00000438874 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
TSG101-202ENST00000438874 FANCD2Q9BXW9 1451 aa35.32■■■■□ 3.24
TSG101-202ENST00000438874 URB2Q14146 1524 aaKnown RBP35.05■■■■□ 3.2
TSG101-202ENST00000438874 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
TSG101-202ENST00000438874 PRDM2Q13029 1718 aa35.01■■■■□ 3.19
TSG101-202ENST00000438874 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
TSG101-202ENST00000438874 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
TSG101-202ENST00000438874 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
TSG101-202ENST00000438874 ABCC8Q09428 1581 aa34.59■■■■□ 3.13
TSG101-202ENST00000438874 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.13
TSG101-202ENST00000438874 OSCARQ8IYS5 282 aa34.57■■■■□ 3.12
TSG101-202ENST00000438874 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
TSG101-202ENST00000438874 EIF4G3O43432 1585 aaKnown RBP34.42■■■■□ 3.1
TSG101-202ENST00000438874 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
TSG101-202ENST00000438874 POLA1P09884 1462 aaPredicted RBP34.34■■■■□ 3.09
TSG101-202ENST00000438874 AQRO60306 1485 aaKnown RBP eCLIP34.26■■■■□ 3.07
TSG101-202ENST00000438874 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
TSG101-202ENST00000438874 RIMBP3CA6NJZ7 1639 aa34.18■■■■□ 3.06
TSG101-202ENST00000438874 RIMBP3BA6NNM3 1639 aa34.18■■■■□ 3.06
TSG101-202ENST00000438874 RIMBP3Q9UFD9 1639 aa34.18■■■■□ 3.06
TSG101-202ENST00000438874 SOGA1O94964 1423 aa34.14■■■■□ 3.06
TSG101-202ENST00000438874 CUX1P39880 1505 aa34.14■■■■□ 3.06
TSG101-202ENST00000438874 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
TSG101-202ENST00000438874 CHD1O14646 1710 aa34.1■■■■□ 3.05
TSG101-202ENST00000438874 ARHGEF11O15085 1522 aa34.09■■■■□ 3.05
TSG101-202ENST00000438874 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
TSG101-202ENST00000438874 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
TSG101-202ENST00000438874 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
TSG101-202ENST00000438874 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
TSG101-202ENST00000438874 FBLN2P98095 1184 aa33.92■■■■□ 3.02
TSG101-202ENST00000438874 MAGI1Q96QZ7 1491 aaPredicted RBP33.87■■■■□ 3.01
TSG101-202ENST00000438874 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
TSG101-202ENST00000438874 ARAP1Q96P48 1450 aa33.78■■■■□ 3
TSG101-202ENST00000438874 CLASP1Q7Z460 1538 aa33.78■■■■□ 3
TSG101-202ENST00000438874 ABCA10Q8WWZ4 1543 aa33.77■■■■□ 3
TSG101-202ENST00000438874 SYNJ2O15056 1496 aa33.75■■■□□ 2.99
TSG101-202ENST00000438874 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
TSG101-202ENST00000438874 CYB5RLQ6IPT4 315 aa33.74■■■□□ 2.99
TSG101-202ENST00000438874 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
TSG101-202ENST00000438874 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
TSG101-202ENST00000438874 CHMP7Q8WUX9 453 aaPredicted RBP33.72■■■□□ 2.99
TSG101-202ENST00000438874 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
TSG101-202ENST00000438874 BIVM-ERCC5R4GMW8 1640 aa33.62■■■□□ 2.97
TSG101-202ENST00000438874 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
TSG101-202ENST00000438874 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.977e-7■■■■■ 52.5
TSG101-202ENST00000438874 ADAMTS12P58397 1594 aa33.46■■■□□ 2.95
TSG101-202ENST00000438874 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
TSG101-202ENST00000438874 NUP160Q12769 1436 aa33.35■■■□□ 2.93
TSG101-202ENST00000438874 ERICH3Q5RHP9 1530 aa33.34■■■□□ 2.93
TSG101-202ENST00000438874 FHAD1B1AJZ9 1412 aa33.33■■■□□ 2.93
TSG101-202ENST00000438874 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
TSG101-202ENST00000438874 TRHP20396 242 aaPredicted RBP33.29■■■□□ 2.92
TSG101-202ENST00000438874 ERCC6L2Q5T890 1561 aa33.24■■■□□ 2.91
TSG101-202ENST00000438874 SHROOM2Q13796 1616 aa33.2■■■□□ 2.9
TSG101-202ENST00000438874 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
TSG101-202ENST00000438874 PRG4Q92954 1404 aaPredicted RBP32.95■■■□□ 2.87
TSG101-202ENST00000438874 KIF27Q86VH2 1401 aa32.93■■■□□ 2.86
TSG101-202ENST00000438874 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms