RNA–Protein interactions for RNA: ENST00000438650.5

GSKIP-201, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GSKIP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-201ENST00000438650 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
GSKIP-201ENST00000438650 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
GSKIP-201ENST00000438650 ABCC9O60706 1549 aa32.94■■■□□ 2.86
GSKIP-201ENST00000438650 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
GSKIP-201ENST00000438650 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
GSKIP-201ENST00000438650 NACADO15069 1562 aa31.74■■■□□ 2.67
GSKIP-201ENST00000438650 RB1CC1Q8TDY2 1594 aa31.72■■■□□ 2.67
GSKIP-201ENST00000438650 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
GSKIP-201ENST00000438650 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
GSKIP-201ENST00000438650 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
GSKIP-201ENST00000438650 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
GSKIP-201ENST00000438650 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
GSKIP-201ENST00000438650 BICRAQ9NZM4 1560 aa30.81■■■□□ 2.52
GSKIP-201ENST00000438650 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
GSKIP-201ENST00000438650 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
GSKIP-201ENST00000438650 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
GSKIP-201ENST00000438650 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
GSKIP-201ENST00000438650 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
GSKIP-201ENST00000438650 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
GSKIP-201ENST00000438650 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
GSKIP-201ENST00000438650 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
GSKIP-201ENST00000438650 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
GSKIP-201ENST00000438650 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
GSKIP-201ENST00000438650 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
GSKIP-201ENST00000438650 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
GSKIP-201ENST00000438650 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
GSKIP-201ENST00000438650 WIZO95785 1651 aa29.23■■■□□ 2.27
GSKIP-201ENST00000438650 HMGXB3Q12766 1538 aa29.18■■■□□ 2.26
GSKIP-201ENST00000438650 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
GSKIP-201ENST00000438650 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
GSKIP-201ENST00000438650 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
GSKIP-201ENST00000438650 NESP48681 1621 aa28.61■■■□□ 2.17
GSKIP-201ENST00000438650 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
GSKIP-201ENST00000438650 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
GSKIP-201ENST00000438650 LAMC3Q9Y6N6 1575 aa28.48■■■□□ 2.15
GSKIP-201ENST00000438650 CFTRP13569 1480 aa28.38■■■□□ 2.13
GSKIP-201ENST00000438650 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
GSKIP-201ENST00000438650 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
GSKIP-201ENST00000438650 KIF21AQ7Z4S6 1674 aa28.25■■■□□ 2.11
GSKIP-201ENST00000438650 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
GSKIP-201ENST00000438650 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
GSKIP-201ENST00000438650 CEP164Q9UPV0 1460 aa28.09■■■□□ 2.09
GSKIP-201ENST00000438650 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
GSKIP-201ENST00000438650 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
GSKIP-201ENST00000438650 WDR62O43379 1518 aa27.89■■■□□ 2.06
GSKIP-201ENST00000438650 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
GSKIP-201ENST00000438650 CUX2O14529 1486 aa27.88■■■□□ 2.05
GSKIP-201ENST00000438650 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
GSKIP-201ENST00000438650 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
GSKIP-201ENST00000438650 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
GSKIP-201ENST00000438650 CUX1P39880 1505 aa27.67■■■□□ 2.02
GSKIP-201ENST00000438650 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
GSKIP-201ENST00000438650 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
GSKIP-201ENST00000438650 SYNJ1O43426 1573 aa27.52■■■□□ 2
GSKIP-201ENST00000438650 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
GSKIP-201ENST00000438650 TOP2BQ02880 1626 aa27.48■■□□□ 1.99
GSKIP-201ENST00000438650 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
GSKIP-201ENST00000438650 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
GSKIP-201ENST00000438650 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
GSKIP-201ENST00000438650 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
GSKIP-201ENST00000438650 SOGA1O94964 1423 aa27.43■■□□□ 1.98
GSKIP-201ENST00000438650 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
GSKIP-201ENST00000438650 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.96
GSKIP-201ENST00000438650 TDRD9Q8NDG6 1382 aaKnown RBP27.28■■□□□ 1.96
GSKIP-201ENST00000438650 EIF4G3O43432 1585 aaKnown RBP27.28■■□□□ 1.96
GSKIP-201ENST00000438650 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
GSKIP-201ENST00000438650 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
GSKIP-201ENST00000438650 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
GSKIP-201ENST00000438650 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
GSKIP-201ENST00000438650 GAPVD1Q14C86 1478 aa27.11■■□□□ 1.93
GSKIP-201ENST00000438650 GRIN2BQ13224 1484 aa27.05■■□□□ 1.92
GSKIP-201ENST00000438650 PBRM1Q86U86 1689 aa27.04■■□□□ 1.92
GSKIP-201ENST00000438650 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
GSKIP-201ENST00000438650 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
GSKIP-201ENST00000438650 KIF27Q86VH2 1401 aa26.95■■□□□ 1.91
GSKIP-201ENST00000438650 MAGI1Q96QZ7 1491 aaPredicted RBP26.94■■□□□ 1.9
GSKIP-201ENST00000438650 FBLN2P98095 1184 aa26.92■■□□□ 1.9
GSKIP-201ENST00000438650 ERICH3Q5RHP9 1530 aa26.91■■□□□ 1.9
GSKIP-201ENST00000438650 CHD1O14646 1710 aa26.89■■□□□ 1.9
GSKIP-201ENST00000438650 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
GSKIP-201ENST00000438650 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
GSKIP-201ENST00000438650 IGF1RP08069 1367 aa26.85■■□□□ 1.89
GSKIP-201ENST00000438650 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
GSKIP-201ENST00000438650 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
GSKIP-201ENST00000438650 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
GSKIP-201ENST00000438650 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
GSKIP-201ENST00000438650 DNAJC5Q9H3Z4 198 aa26.76■■□□□ 1.87
GSKIP-201ENST00000438650 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
GSKIP-201ENST00000438650 CUL7Q14999 1698 aa26.71■■□□□ 1.87
GSKIP-201ENST00000438650 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
GSKIP-201ENST00000438650 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
GSKIP-201ENST00000438650 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
GSKIP-201ENST00000438650 NUP160Q12769 1436 aa26.58■■□□□ 1.85
GSKIP-201ENST00000438650 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
GSKIP-201ENST00000438650 EEA1Q15075 1411 aa26.57■■□□□ 1.84
GSKIP-201ENST00000438650 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
GSKIP-201ENST00000438650 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
GSKIP-201ENST00000438650 PRXQ9BXM0 1461 aa26.52■■□□□ 1.84
GSKIP-201ENST00000438650 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
GSKIP-201ENST00000438650 KIAA0586Q9BVV6 1533 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms