RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
GSE1-206ENST00000438180 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
GSE1-206ENST00000438180 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
GSE1-206ENST00000438180 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
GSE1-206ENST00000438180 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
GSE1-206ENST00000438180 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
GSE1-206ENST00000438180 ABCC9O60706 1549 aa30.73■■■□□ 2.51
GSE1-206ENST00000438180 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
GSE1-206ENST00000438180 NACADO15069 1562 aa30.49■■■□□ 2.47
GSE1-206ENST00000438180 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
GSE1-206ENST00000438180 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
GSE1-206ENST00000438180 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
GSE1-206ENST00000438180 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
GSE1-206ENST00000438180 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
GSE1-206ENST00000438180 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
GSE1-206ENST00000438180 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
GSE1-206ENST00000438180 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
GSE1-206ENST00000438180 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
GSE1-206ENST00000438180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
GSE1-206ENST00000438180 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
GSE1-206ENST00000438180 WIZO95785 1651 aa28.78■■■□□ 2.2
GSE1-206ENST00000438180 TOP2AP11388 1531 aaKnown RBP28.56■■■□□ 2.16
GSE1-206ENST00000438180 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
GSE1-206ENST00000438180 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
GSE1-206ENST00000438180 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
GSE1-206ENST00000438180 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
GSE1-206ENST00000438180 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
GSE1-206ENST00000438180 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
GSE1-206ENST00000438180 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.11
GSE1-206ENST00000438180 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
GSE1-206ENST00000438180 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
GSE1-206ENST00000438180 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
GSE1-206ENST00000438180 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
GSE1-206ENST00000438180 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
GSE1-206ENST00000438180 CFTRP13569 1480 aa27.51■■□□□ 1.99
GSE1-206ENST00000438180 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
GSE1-206ENST00000438180 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
GSE1-206ENST00000438180 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
GSE1-206ENST00000438180 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
GSE1-206ENST00000438180 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
GSE1-206ENST00000438180 EEA1Q15075 1411 aa27.29■■□□□ 1.96
GSE1-206ENST00000438180 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
GSE1-206ENST00000438180 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
GSE1-206ENST00000438180 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
GSE1-206ENST00000438180 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
GSE1-206ENST00000438180 SOGA1O94964 1423 aa27.14■■□□□ 1.94
GSE1-206ENST00000438180 CUX1P39880 1505 aa27.12■■□□□ 1.93
GSE1-206ENST00000438180 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
GSE1-206ENST00000438180 CSRNP3Q8WYN3 585 aa27.02■■□□□ 1.92
GSE1-206ENST00000438180 NESP48681 1621 aa27■■□□□ 1.91
GSE1-206ENST00000438180 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
GSE1-206ENST00000438180 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
GSE1-206ENST00000438180 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
GSE1-206ENST00000438180 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
GSE1-206ENST00000438180 KIF21BO75037 1637 aa26.89■■□□□ 1.89
GSE1-206ENST00000438180 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
GSE1-206ENST00000438180 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
GSE1-206ENST00000438180 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
GSE1-206ENST00000438180 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
GSE1-206ENST00000438180 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
GSE1-206ENST00000438180 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
GSE1-206ENST00000438180 TNIKQ9UKE5 1360 aa26.79■■□□□ 1.88
GSE1-206ENST00000438180 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
GSE1-206ENST00000438180 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
GSE1-206ENST00000438180 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
GSE1-206ENST00000438180 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
GSE1-206ENST00000438180 CUX2O14529 1486 aa26.68■■□□□ 1.86
GSE1-206ENST00000438180 POLA1P09884 1462 aaPredicted RBP26.67■■□□□ 1.86
GSE1-206ENST00000438180 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
GSE1-206ENST00000438180 CEP162Q5TB80 1403 aa26.64■■□□□ 1.86
GSE1-206ENST00000438180 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
GSE1-206ENST00000438180 RAPGEF2Q9Y4G8 1499 aa26.61■■□□□ 1.85
GSE1-206ENST00000438180 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
GSE1-206ENST00000438180 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
GSE1-206ENST00000438180 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
GSE1-206ENST00000438180 IGF1RP08069 1367 aa26.5■■□□□ 1.83
GSE1-206ENST00000438180 CLIP1P30622 1438 aa26.41■■□□□ 1.82
GSE1-206ENST00000438180 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
GSE1-206ENST00000438180 WDR62O43379 1518 aa26.41■■□□□ 1.82
GSE1-206ENST00000438180 CUL7Q14999 1698 aa26.41■■□□□ 1.82
GSE1-206ENST00000438180 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
GSE1-206ENST00000438180 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
GSE1-206ENST00000438180 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
GSE1-206ENST00000438180 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
GSE1-206ENST00000438180 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
GSE1-206ENST00000438180 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
GSE1-206ENST00000438180 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
GSE1-206ENST00000438180 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
GSE1-206ENST00000438180 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
GSE1-206ENST00000438180 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
GSE1-206ENST00000438180 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
GSE1-206ENST00000438180 CTTNBP2Q8WZ74 1663 aa26.12■■□□□ 1.77
GSE1-206ENST00000438180 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
GSE1-206ENST00000438180 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
GSE1-206ENST00000438180 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
GSE1-206ENST00000438180 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.762e-8■■■■■ 36.5
GSE1-206ENST00000438180 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
GSE1-206ENST00000438180 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
GSE1-206ENST00000438180 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
GSE1-206ENST00000438180 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms