RNA–Protein interactions for RNA: ENST00000438162.5

FLOT1-205, Transcript of flotillin 1, humanhuman

TSL 5

Gene FLOT1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-205ENST00000438162 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
FLOT1-205ENST00000438162 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
FLOT1-205ENST00000438162 ABCC9O60706 1549 aa29.1■■■□□ 2.25
FLOT1-205ENST00000438162 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
FLOT1-205ENST00000438162 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
FLOT1-205ENST00000438162 NACADO15069 1562 aa27.8■■■□□ 2.04
FLOT1-205ENST00000438162 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
FLOT1-205ENST00000438162 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
FLOT1-205ENST00000438162 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
FLOT1-205ENST00000438162 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.942e-17■■□□□ 13.3
FLOT1-205ENST00000438162 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
FLOT1-205ENST00000438162 BICRAQ9NZM4 1560 aa27.04■■□□□ 1.92
FLOT1-205ENST00000438162 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
FLOT1-205ENST00000438162 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
FLOT1-205ENST00000438162 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
FLOT1-205ENST00000438162 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
FLOT1-205ENST00000438162 CC2D2AQ9P2K1 1620 aa26.26■■□□□ 1.79
FLOT1-205ENST00000438162 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
FLOT1-205ENST00000438162 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
FLOT1-205ENST00000438162 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
FLOT1-205ENST00000438162 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.7
FLOT1-205ENST00000438162 NCAPD3P42695 1498 aa25.68■■□□□ 1.7
FLOT1-205ENST00000438162 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
FLOT1-205ENST00000438162 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
FLOT1-205ENST00000438162 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
FLOT1-205ENST00000438162 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
FLOT1-205ENST00000438162 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
FLOT1-205ENST00000438162 WIZO95785 1651 aa25.32■■□□□ 1.64
FLOT1-205ENST00000438162 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
FLOT1-205ENST00000438162 NESP48681 1621 aa25.14■■□□□ 1.61
FLOT1-205ENST00000438162 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
FLOT1-205ENST00000438162 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
FLOT1-205ENST00000438162 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
FLOT1-205ENST00000438162 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
FLOT1-205ENST00000438162 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
FLOT1-205ENST00000438162 CUX2O14529 1486 aa24.79■■□□□ 1.56
FLOT1-205ENST00000438162 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
FLOT1-205ENST00000438162 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
FLOT1-205ENST00000438162 CFTRP13569 1480 aa24.77■■□□□ 1.56
FLOT1-205ENST00000438162 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
FLOT1-205ENST00000438162 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
FLOT1-205ENST00000438162 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
FLOT1-205ENST00000438162 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
FLOT1-205ENST00000438162 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
FLOT1-205ENST00000438162 WDR62O43379 1518 aa24.53■■□□□ 1.52
FLOT1-205ENST00000438162 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
FLOT1-205ENST00000438162 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
FLOT1-205ENST00000438162 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
FLOT1-205ENST00000438162 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
FLOT1-205ENST00000438162 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
FLOT1-205ENST00000438162 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
FLOT1-205ENST00000438162 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
FLOT1-205ENST00000438162 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
FLOT1-205ENST00000438162 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
FLOT1-205ENST00000438162 CUX1P39880 1505 aa24.05■■□□□ 1.44
FLOT1-205ENST00000438162 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
FLOT1-205ENST00000438162 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
FLOT1-205ENST00000438162 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
FLOT1-205ENST00000438162 SOGA1O94964 1423 aa23.96■■□□□ 1.43
FLOT1-205ENST00000438162 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
FLOT1-205ENST00000438162 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.423e-8■■■■■ 34.2
FLOT1-205ENST00000438162 TDRD9Q8NDG6 1382 aaKnown RBP23.87■■□□□ 1.41
FLOT1-205ENST00000438162 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
FLOT1-205ENST00000438162 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
FLOT1-205ENST00000438162 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
FLOT1-205ENST00000438162 TOP2BQ02880 1626 aa23.78■■□□□ 1.4
FLOT1-205ENST00000438162 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
FLOT1-205ENST00000438162 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
FLOT1-205ENST00000438162 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
FLOT1-205ENST00000438162 FBLN2P98095 1184 aa23.68■■□□□ 1.38
FLOT1-205ENST00000438162 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
FLOT1-205ENST00000438162 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
FLOT1-205ENST00000438162 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
FLOT1-205ENST00000438162 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
FLOT1-205ENST00000438162 MAGI1Q96QZ7 1491 aaPredicted RBP23.61■■□□□ 1.37
FLOT1-205ENST00000438162 CHD1O14646 1710 aa23.6■■□□□ 1.37
FLOT1-205ENST00000438162 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
FLOT1-205ENST00000438162 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
FLOT1-205ENST00000438162 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
FLOT1-205ENST00000438162 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
FLOT1-205ENST00000438162 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
FLOT1-205ENST00000438162 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
FLOT1-205ENST00000438162 ARHGEF11O15085 1522 aa23.39■■□□□ 1.34
FLOT1-205ENST00000438162 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
FLOT1-205ENST00000438162 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
FLOT1-205ENST00000438162 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
FLOT1-205ENST00000438162 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
FLOT1-205ENST00000438162 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
FLOT1-205ENST00000438162 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
FLOT1-205ENST00000438162 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
FLOT1-205ENST00000438162 IGF1RP08069 1367 aa23.29■■□□□ 1.32
FLOT1-205ENST00000438162 NUP160Q12769 1436 aa23.26■■□□□ 1.31
FLOT1-205ENST00000438162 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
FLOT1-205ENST00000438162 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
FLOT1-205ENST00000438162 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
FLOT1-205ENST00000438162 CUL7Q14999 1698 aa23.17■■□□□ 1.3
FLOT1-205ENST00000438162 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
FLOT1-205ENST00000438162 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
FLOT1-205ENST00000438162 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
FLOT1-205ENST00000438162 SHROOM2Q13796 1616 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms