RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 NISCHQ9Y2I1 1504 aa43.24■■■■■ 4.51
SBDSP1-203ENST00000437201 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
SBDSP1-203ENST00000437201 ABCC9O60706 1549 aa38.3■■■■□ 3.72
SBDSP1-203ENST00000437201 RB1CC1Q8TDY2 1594 aa36.67■■■■□ 3.46
SBDSP1-203ENST00000437201 NACADO15069 1562 aa36.51■■■■□ 3.44
SBDSP1-203ENST00000437201 DCAF8L2P0C7V8 631 aa36.43■■■■□ 3.42
SBDSP1-203ENST00000437201 MYO15BQ96JP2 1530 aa36.15■■■■□ 3.38
SBDSP1-203ENST00000437201 ZCCHC6Q5VYS8 1495 aaKnown RBP35.89■■■■□ 3.34
SBDSP1-203ENST00000437201 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
SBDSP1-203ENST00000437201 PABPN1Q86U42 306 aaKnown RBP eCLIP35.74■■■■□ 3.31
SBDSP1-203ENST00000437201 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
SBDSP1-203ENST00000437201 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
SBDSP1-203ENST00000437201 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
SBDSP1-203ENST00000437201 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
SBDSP1-203ENST00000437201 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
SBDSP1-203ENST00000437201 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
SBDSP1-203ENST00000437201 CC2D2AQ9P2K1 1620 aa34.61■■■■□ 3.13
SBDSP1-203ENST00000437201 CECR2Q9BXF3 1484 aa34.51■■■■□ 3.11
SBDSP1-203ENST00000437201 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
SBDSP1-203ENST00000437201 SMARCA4P51532 1647 aa33.63■■■□□ 2.97
SBDSP1-203ENST00000437201 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
SBDSP1-203ENST00000437201 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
SBDSP1-203ENST00000437201 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
SBDSP1-203ENST00000437201 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
SBDSP1-203ENST00000437201 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
SBDSP1-203ENST00000437201 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
SBDSP1-203ENST00000437201 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
SBDSP1-203ENST00000437201 ERCC6Q03468 1493 aa33.13■■■□□ 2.89
SBDSP1-203ENST00000437201 NESP48681 1621 aa32.95■■■□□ 2.87
SBDSP1-203ENST00000437201 CUX2O14529 1486 aa32.95■■■□□ 2.87
SBDSP1-203ENST00000437201 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
SBDSP1-203ENST00000437201 WIZO95785 1651 aa32.86■■■□□ 2.85
SBDSP1-203ENST00000437201 RSF1Q96T23 1441 aaPredicted RBP32.76■■■□□ 2.83
SBDSP1-203ENST00000437201 PDS5BQ9NTI5 1447 aa32.74■■■□□ 2.83
SBDSP1-203ENST00000437201 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
SBDSP1-203ENST00000437201 THOC2Q8NI27 1593 aaKnown RBP32.56■■■□□ 2.8
SBDSP1-203ENST00000437201 DNAJC5Q9H3Z4 198 aa32.55■■■□□ 2.8
SBDSP1-203ENST00000437201 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
SBDSP1-203ENST00000437201 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
SBDSP1-203ENST00000437201 CFTRP13569 1480 aa32.38■■■□□ 2.77
SBDSP1-203ENST00000437201 MRC2Q9UBG0 1479 aa32.37■■■□□ 2.77
SBDSP1-203ENST00000437201 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
SBDSP1-203ENST00000437201 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
SBDSP1-203ENST00000437201 WDR62O43379 1518 aa32.26■■■□□ 2.75
SBDSP1-203ENST00000437201 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
SBDSP1-203ENST00000437201 PRDM2Q13029 1718 aa32■■■□□ 2.71
SBDSP1-203ENST00000437201 URB2Q14146 1524 aaKnown RBP31.96■■■□□ 2.71
SBDSP1-203ENST00000437201 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
SBDSP1-203ENST00000437201 TOPBP1Q92547 1522 aa31.71■■■□□ 2.67
SBDSP1-203ENST00000437201 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
SBDSP1-203ENST00000437201 DNMBPQ6XZF7 1577 aa31.63■■■□□ 2.65
SBDSP1-203ENST00000437201 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
SBDSP1-203ENST00000437201 OSCARQ8IYS5 282 aa31.56■■■□□ 2.64
SBDSP1-203ENST00000437201 ZNF608Q9ULD9 1512 aaPredicted RBP31.5■■■□□ 2.63
SBDSP1-203ENST00000437201 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
SBDSP1-203ENST00000437201 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
SBDSP1-203ENST00000437201 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
SBDSP1-203ENST00000437201 SOGA1O94964 1423 aa31.32■■■□□ 2.61
SBDSP1-203ENST00000437201 AQRO60306 1485 aaKnown RBP eCLIP31.3■■■□□ 2.6
SBDSP1-203ENST00000437201 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
SBDSP1-203ENST00000437201 CUX1P39880 1505 aa31.25■■■□□ 2.59
SBDSP1-203ENST00000437201 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
SBDSP1-203ENST00000437201 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
SBDSP1-203ENST00000437201 TDRD9Q8NDG6 1382 aaKnown RBP31.18■■■□□ 2.58
SBDSP1-203ENST00000437201 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
SBDSP1-203ENST00000437201 FBLN2P98095 1184 aa31.11■■■□□ 2.57
SBDSP1-203ENST00000437201 GRIN2BQ13224 1484 aa31.01■■■□□ 2.56
SBDSP1-203ENST00000437201 CHD1O14646 1710 aa31.01■■■□□ 2.56
SBDSP1-203ENST00000437201 SNAPC4Q5SXM2 1469 aa30.99■■■□□ 2.55
SBDSP1-203ENST00000437201 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
SBDSP1-203ENST00000437201 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
SBDSP1-203ENST00000437201 RIMBP3CA6NJZ7 1639 aa30.96■■■□□ 2.55
SBDSP1-203ENST00000437201 RIMBP3BA6NNM3 1639 aa30.96■■■□□ 2.55
SBDSP1-203ENST00000437201 RIMBP3Q9UFD9 1639 aa30.96■■■□□ 2.55
SBDSP1-203ENST00000437201 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
SBDSP1-203ENST00000437201 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.54
SBDSP1-203ENST00000437201 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
SBDSP1-203ENST00000437201 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
SBDSP1-203ENST00000437201 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
SBDSP1-203ENST00000437201 SYNJ2O15056 1496 aa30.86■■■□□ 2.53
SBDSP1-203ENST00000437201 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
SBDSP1-203ENST00000437201 ABCA5Q8WWZ7 1642 aa30.81■■■□□ 2.52
SBDSP1-203ENST00000437201 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
SBDSP1-203ENST00000437201 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
SBDSP1-203ENST00000437201 CYB5RLQ6IPT4 315 aa30.75■■■□□ 2.51
SBDSP1-203ENST00000437201 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
SBDSP1-203ENST00000437201 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
SBDSP1-203ENST00000437201 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
SBDSP1-203ENST00000437201 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
SBDSP1-203ENST00000437201 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
SBDSP1-203ENST00000437201 ADAMTS12P58397 1594 aa30.56■■■□□ 2.48
SBDSP1-203ENST00000437201 NUP160Q12769 1436 aa30.47■■■□□ 2.47
SBDSP1-203ENST00000437201 CEP170Q5SW79 1584 aa30.39■■■□□ 2.46
SBDSP1-203ENST00000437201 KIF27Q86VH2 1401 aa30.37■■■□□ 2.45
SBDSP1-203ENST00000437201 TRHP20396 242 aaPredicted RBP30.34■■■□□ 2.45
SBDSP1-203ENST00000437201 IGF1RP08069 1367 aa30.28■■■□□ 2.44
SBDSP1-203ENST00000437201 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
SBDSP1-203ENST00000437201 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
SBDSP1-203ENST00000437201 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.43
SBDSP1-203ENST00000437201 CUL7Q14999 1698 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms