RNA–Protein interactions for RNA: ENST00000437198.6

PARN-203, Transcript of poly(A)-specific ribonuclease, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARN, Length 3,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARN-203ENST00000437198 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
PARN-203ENST00000437198 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
PARN-203ENST00000437198 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
PARN-203ENST00000437198 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
PARN-203ENST00000437198 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
PARN-203ENST00000437198 NACADO15069 1562 aa22.69■■□□□ 1.22
PARN-203ENST00000437198 ABCC9O60706 1549 aa22.56■■□□□ 1.2
PARN-203ENST00000437198 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
PARN-203ENST00000437198 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
PARN-203ENST00000437198 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.15
PARN-203ENST00000437198 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
PARN-203ENST00000437198 UNC13AQ9UPW8 1703 aa21.98■■□□□ 1.11
PARN-203ENST00000437198 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
PARN-203ENST00000437198 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
PARN-203ENST00000437198 HRCP23327 699 aa21.5■■□□□ 1.03
PARN-203ENST00000437198 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
PARN-203ENST00000437198 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
PARN-203ENST00000437198 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
PARN-203ENST00000437198 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
PARN-203ENST00000437198 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
PARN-203ENST00000437198 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
PARN-203ENST00000437198 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
PARN-203ENST00000437198 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
PARN-203ENST00000437198 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
PARN-203ENST00000437198 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
PARN-203ENST00000437198 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
PARN-203ENST00000437198 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
PARN-203ENST00000437198 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
PARN-203ENST00000437198 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
PARN-203ENST00000437198 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
PARN-203ENST00000437198 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
PARN-203ENST00000437198 WIZO95785 1651 aa20.91■□□□□ 0.94
PARN-203ENST00000437198 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
PARN-203ENST00000437198 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
PARN-203ENST00000437198 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
PARN-203ENST00000437198 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
PARN-203ENST00000437198 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
PARN-203ENST00000437198 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
PARN-203ENST00000437198 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
PARN-203ENST00000437198 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
PARN-203ENST00000437198 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
PARN-203ENST00000437198 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
PARN-203ENST00000437198 CFTRP13569 1480 aa20.28■□□□□ 0.84
PARN-203ENST00000437198 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
PARN-203ENST00000437198 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
PARN-203ENST00000437198 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
PARN-203ENST00000437198 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
PARN-203ENST00000437198 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
PARN-203ENST00000437198 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
PARN-203ENST00000437198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
PARN-203ENST00000437198 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
PARN-203ENST00000437198 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
PARN-203ENST00000437198 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
PARN-203ENST00000437198 NEUROD1Q13562 356 aa19.89■□□□□ 0.78
PARN-203ENST00000437198 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
PARN-203ENST00000437198 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
PARN-203ENST00000437198 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
PARN-203ENST00000437198 ACIN1Q9UKV3 1341 aaKnown RBP19.86■□□□□ 0.77
PARN-203ENST00000437198 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
PARN-203ENST00000437198 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
PARN-203ENST00000437198 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
PARN-203ENST00000437198 CUX1P39880 1505 aa19.8■□□□□ 0.76
PARN-203ENST00000437198 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
PARN-203ENST00000437198 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
PARN-203ENST00000437198 NESP48681 1621 aa19.78■□□□□ 0.76
PARN-203ENST00000437198 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.76
PARN-203ENST00000437198 MYT1Q01538 1121 aa19.77■□□□□ 0.76
PARN-203ENST00000437198 EEA1Q15075 1411 aa19.73■□□□□ 0.75
PARN-203ENST00000437198 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
PARN-203ENST00000437198 CCER1Q8TC90 406 aaPredicted RBP19.72■□□□□ 0.75
PARN-203ENST00000437198 WDR62O43379 1518 aa19.72■□□□□ 0.75
PARN-203ENST00000437198 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
PARN-203ENST00000437198 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
PARN-203ENST00000437198 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
PARN-203ENST00000437198 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
PARN-203ENST00000437198 YTHDC1Q96MU7 727 aaKnown RBP19.64■□□□□ 0.73
PARN-203ENST00000437198 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.72
PARN-203ENST00000437198 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
PARN-203ENST00000437198 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
PARN-203ENST00000437198 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
PARN-203ENST00000437198 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
PARN-203ENST00000437198 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
PARN-203ENST00000437198 KIF21BO75037 1637 aa19.49■□□□□ 0.71
PARN-203ENST00000437198 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
PARN-203ENST00000437198 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
PARN-203ENST00000437198 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
PARN-203ENST00000437198 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
PARN-203ENST00000437198 CUX2O14529 1486 aa19.42■□□□□ 0.7
PARN-203ENST00000437198 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
PARN-203ENST00000437198 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
PARN-203ENST00000437198 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
PARN-203ENST00000437198 CUL7Q14999 1698 aa19.4■□□□□ 0.7
PARN-203ENST00000437198 SOGA1O94964 1423 aa19.37■□□□□ 0.69
PARN-203ENST00000437198 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
PARN-203ENST00000437198 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
PARN-203ENST00000437198 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
PARN-203ENST00000437198 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.68
PARN-203ENST00000437198 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
PARN-203ENST00000437198 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PARN-203ENST00000437198 IGF1RP08069 1367 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms