RNA–Protein interactions for RNA: ENST00000437110.5

TSSC4-205, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-205ENST00000437110 NISCHQ9Y2I1 1504 aa40.11■■■■■ 4.01
TSSC4-205ENST00000437110 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
TSSC4-205ENST00000437110 ABCC9O60706 1549 aa34.09■■■■□ 3.05
TSSC4-205ENST00000437110 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
TSSC4-205ENST00000437110 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
TSSC4-205ENST00000437110 MYO15BQ96JP2 1530 aa33.24■■■□□ 2.91
TSSC4-205ENST00000437110 NACADO15069 1562 aa33.23■■■□□ 2.91
TSSC4-205ENST00000437110 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
TSSC4-205ENST00000437110 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
TSSC4-205ENST00000437110 UNC13AQ9UPW8 1703 aa32.34■■■□□ 2.77
TSSC4-205ENST00000437110 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
TSSC4-205ENST00000437110 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
TSSC4-205ENST00000437110 PABPN1Q86U42 306 aaKnown RBP eCLIP31.93■■■□□ 2.7
TSSC4-205ENST00000437110 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
TSSC4-205ENST00000437110 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
TSSC4-205ENST00000437110 CECR2Q9BXF3 1484 aa31.12■■■□□ 2.57
TSSC4-205ENST00000437110 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
TSSC4-205ENST00000437110 SMARCA4P51532 1647 aa31■■■□□ 2.55
TSSC4-205ENST00000437110 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
TSSC4-205ENST00000437110 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
TSSC4-205ENST00000437110 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
TSSC4-205ENST00000437110 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
TSSC4-205ENST00000437110 SMARCA2P51531 1590 aa30.73■■■□□ 2.51
TSSC4-205ENST00000437110 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
TSSC4-205ENST00000437110 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.5
TSSC4-205ENST00000437110 NCAPD3P42695 1498 aa30.64■■■□□ 2.5
TSSC4-205ENST00000437110 WIZO95785 1651 aa30.57■■■□□ 2.48
TSSC4-205ENST00000437110 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
TSSC4-205ENST00000437110 BAZ1BQ9UIG0 1483 aaKnown RBP30.47■■■□□ 2.47
TSSC4-205ENST00000437110 TOP2AP11388 1531 aaKnown RBP30.31■■■□□ 2.44
TSSC4-205ENST00000437110 SUPT5HO00267 1087 aaKnown RBP30.28■■■□□ 2.44
TSSC4-205ENST00000437110 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
TSSC4-205ENST00000437110 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
TSSC4-205ENST00000437110 LAMC3Q9Y6N6 1575 aa29.76■■■□□ 2.35
TSSC4-205ENST00000437110 CFTRP13569 1480 aa29.69■■■□□ 2.34
TSSC4-205ENST00000437110 NESP48681 1621 aa29.64■■■□□ 2.34
TSSC4-205ENST00000437110 PRDM2Q13029 1718 aa29.56■■■□□ 2.32
TSSC4-205ENST00000437110 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
TSSC4-205ENST00000437110 FANCD2Q9BXW9 1451 aa29.39■■■□□ 2.3
TSSC4-205ENST00000437110 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
TSSC4-205ENST00000437110 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
TSSC4-205ENST00000437110 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
TSSC4-205ENST00000437110 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
TSSC4-205ENST00000437110 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
TSSC4-205ENST00000437110 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
TSSC4-205ENST00000437110 WDR62O43379 1518 aa29.05■■■□□ 2.24
TSSC4-205ENST00000437110 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
TSSC4-205ENST00000437110 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.24
TSSC4-205ENST00000437110 TOPBP1Q92547 1522 aa28.98■■■□□ 2.23
TSSC4-205ENST00000437110 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
TSSC4-205ENST00000437110 CUX2O14529 1486 aa28.94■■■□□ 2.22
TSSC4-205ENST00000437110 CUX1P39880 1505 aa28.94■■■□□ 2.22
TSSC4-205ENST00000437110 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
TSSC4-205ENST00000437110 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
TSSC4-205ENST00000437110 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
TSSC4-205ENST00000437110 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
TSSC4-205ENST00000437110 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
TSSC4-205ENST00000437110 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
TSSC4-205ENST00000437110 SOGA1O94964 1423 aa28.68■■■□□ 2.18
TSSC4-205ENST00000437110 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
TSSC4-205ENST00000437110 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.18
TSSC4-205ENST00000437110 CHIC1Q5VXU3 224 aa28.61■■■□□ 2.17
TSSC4-205ENST00000437110 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
TSSC4-205ENST00000437110 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
TSSC4-205ENST00000437110 WDR97A6NE52 1622 aa28.53■■■□□ 2.16
TSSC4-205ENST00000437110 ZNF608Q9ULD9 1512 aaPredicted RBP28.44■■■□□ 2.14
TSSC4-205ENST00000437110 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
TSSC4-205ENST00000437110 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
TSSC4-205ENST00000437110 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.13
TSSC4-205ENST00000437110 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
TSSC4-205ENST00000437110 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
TSSC4-205ENST00000437110 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
TSSC4-205ENST00000437110 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
TSSC4-205ENST00000437110 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
TSSC4-205ENST00000437110 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
TSSC4-205ENST00000437110 EEA1Q15075 1411 aa28.2■■■□□ 2.11
TSSC4-205ENST00000437110 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
TSSC4-205ENST00000437110 IGF1RP08069 1367 aa28.15■■■□□ 2.1
TSSC4-205ENST00000437110 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
TSSC4-205ENST00000437110 SNAPC4Q5SXM2 1469 aa28.13■■■□□ 2.09
TSSC4-205ENST00000437110 CUL7Q14999 1698 aa28.09■■■□□ 2.09
TSSC4-205ENST00000437110 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
TSSC4-205ENST00000437110 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
TSSC4-205ENST00000437110 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
TSSC4-205ENST00000437110 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
TSSC4-205ENST00000437110 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
TSSC4-205ENST00000437110 CHMP7Q8WUX9 453 aaPredicted RBP27.98■■■□□ 2.07
TSSC4-205ENST00000437110 CHD1O14646 1710 aa27.95■■■□□ 2.06
TSSC4-205ENST00000437110 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
TSSC4-205ENST00000437110 FBLN2P98095 1184 aa27.93■■■□□ 2.06
TSSC4-205ENST00000437110 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
TSSC4-205ENST00000437110 GRIN2AQ12879 1464 aa27.9■■■□□ 2.06
TSSC4-205ENST00000437110 RAPGEF2Q9Y4G8 1499 aa27.9■■■□□ 2.06
TSSC4-205ENST00000437110 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
TSSC4-205ENST00000437110 KIF21BO75037 1637 aa27.82■■■□□ 2.04
TSSC4-205ENST00000437110 NUP160Q12769 1436 aa27.77■■■□□ 2.04
TSSC4-205ENST00000437110 CEP170Q5SW79 1584 aa27.72■■■□□ 2.03
TSSC4-205ENST00000437110 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
TSSC4-205ENST00000437110 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
TSSC4-205ENST00000437110 KIAA0586Q9BVV6 1533 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms