RNA–Protein interactions for RNA: ENST00000435880.6

PCBP1-AS1-227, PCBP1 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene PCBP1-AS1, Length 2,386 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-AS1-227ENST00000435880 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
PCBP1-AS1-227ENST00000435880 HRCP23327 699 aa19.91■□□□□ 0.78
PCBP1-AS1-227ENST00000435880 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
PCBP1-AS1-227ENST00000435880 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
PCBP1-AS1-227ENST00000435880 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
PCBP1-AS1-227ENST00000435880 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
PCBP1-AS1-227ENST00000435880 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
PCBP1-AS1-227ENST00000435880 MYT1Q01538 1121 aa19.17■□□□□ 0.66
PCBP1-AS1-227ENST00000435880 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
PCBP1-AS1-227ENST00000435880 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
PCBP1-AS1-227ENST00000435880 DCAF8L2P0C7V8 631 aa19.01■□□□□ 0.63
PCBP1-AS1-227ENST00000435880 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
PCBP1-AS1-227ENST00000435880 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
PCBP1-AS1-227ENST00000435880 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
PCBP1-AS1-227ENST00000435880 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
PCBP1-AS1-227ENST00000435880 ABCC9O60706 1549 aa18.83■□□□□ 0.6
PCBP1-AS1-227ENST00000435880 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
PCBP1-AS1-227ENST00000435880 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
PCBP1-AS1-227ENST00000435880 NACADO15069 1562 aa18.46■□□□□ 0.55
PCBP1-AS1-227ENST00000435880 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
PCBP1-AS1-227ENST00000435880 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
PCBP1-AS1-227ENST00000435880 SCRIBQ14160 1630 aa18.33■□□□□ 0.52
PCBP1-AS1-227ENST00000435880 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
PCBP1-AS1-227ENST00000435880 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
PCBP1-AS1-227ENST00000435880 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
PCBP1-AS1-227ENST00000435880 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
PCBP1-AS1-227ENST00000435880 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
PCBP1-AS1-227ENST00000435880 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
PCBP1-AS1-227ENST00000435880 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
PCBP1-AS1-227ENST00000435880 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCBP1-AS1-227ENST00000435880 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
PCBP1-AS1-227ENST00000435880 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
PCBP1-AS1-227ENST00000435880 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
PCBP1-AS1-227ENST00000435880 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
PCBP1-AS1-227ENST00000435880 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
PCBP1-AS1-227ENST00000435880 DNAJC5Q9H3Z4 198 aa17.77■□□□□ 0.44
PCBP1-AS1-227ENST00000435880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
PCBP1-AS1-227ENST00000435880 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.42
PCBP1-AS1-227ENST00000435880 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
PCBP1-AS1-227ENST00000435880 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
PCBP1-AS1-227ENST00000435880 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
PCBP1-AS1-227ENST00000435880 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.41
PCBP1-AS1-227ENST00000435880 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
PCBP1-AS1-227ENST00000435880 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
PCBP1-AS1-227ENST00000435880 WIZO95785 1651 aa17.56■□□□□ 0.4
PCBP1-AS1-227ENST00000435880 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
PCBP1-AS1-227ENST00000435880 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
PCBP1-AS1-227ENST00000435880 CLSPNQ9HAW4 1339 aa17.49■□□□□ 0.39
PCBP1-AS1-227ENST00000435880 MIER1Q8N108 512 aa17.42■□□□□ 0.38
PCBP1-AS1-227ENST00000435880 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
PCBP1-AS1-227ENST00000435880 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
PCBP1-AS1-227ENST00000435880 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.37
PCBP1-AS1-227ENST00000435880 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
PCBP1-AS1-227ENST00000435880 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
PCBP1-AS1-227ENST00000435880 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
PCBP1-AS1-227ENST00000435880 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.35
PCBP1-AS1-227ENST00000435880 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
PCBP1-AS1-227ENST00000435880 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
PCBP1-AS1-227ENST00000435880 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
PCBP1-AS1-227ENST00000435880 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
PCBP1-AS1-227ENST00000435880 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
PCBP1-AS1-227ENST00000435880 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
PCBP1-AS1-227ENST00000435880 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
PCBP1-AS1-227ENST00000435880 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
PCBP1-AS1-227ENST00000435880 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
PCBP1-AS1-227ENST00000435880 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
PCBP1-AS1-227ENST00000435880 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
PCBP1-AS1-227ENST00000435880 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
PCBP1-AS1-227ENST00000435880 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
PCBP1-AS1-227ENST00000435880 SLC24A1O60721 1099 aa16.89■□□□□ 0.3
PCBP1-AS1-227ENST00000435880 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
PCBP1-AS1-227ENST00000435880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
PCBP1-AS1-227ENST00000435880 BCANQ96GW7 911 aa16.82■□□□□ 0.28
PCBP1-AS1-227ENST00000435880 FKBP8Q14318 412 aa16.79■□□□□ 0.28
PCBP1-AS1-227ENST00000435880 MYT1LQ9UL68 1186 aa16.77■□□□□ 0.28
PCBP1-AS1-227ENST00000435880 SOGA1O94964 1423 aa16.76■□□□□ 0.27
PCBP1-AS1-227ENST00000435880 MSH5O43196 834 aa16.75■□□□□ 0.27
PCBP1-AS1-227ENST00000435880 CFTRP13569 1480 aa16.73■□□□□ 0.27
PCBP1-AS1-227ENST00000435880 NEFLP07196 543 aa16.71■□□□□ 0.27
PCBP1-AS1-227ENST00000435880 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 APLP2Q06481 763 aa16.66■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 EEA1Q15075 1411 aa16.66■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
PCBP1-AS1-227ENST00000435880 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
PCBP1-AS1-227ENST00000435880 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
PCBP1-AS1-227ENST00000435880 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
PCBP1-AS1-227ENST00000435880 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.25
PCBP1-AS1-227ENST00000435880 ITGAEP38570 1179 aa16.58■□□□□ 0.24
PCBP1-AS1-227ENST00000435880 NESP48681 1621 aa16.57■□□□□ 0.24
PCBP1-AS1-227ENST00000435880 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
PCBP1-AS1-227ENST00000435880 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
PCBP1-AS1-227ENST00000435880 CUX1P39880 1505 aa16.53■□□□□ 0.24
PCBP1-AS1-227ENST00000435880 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
PCBP1-AS1-227ENST00000435880 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
PCBP1-AS1-227ENST00000435880 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
PCBP1-AS1-227ENST00000435880 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
PCBP1-AS1-227ENST00000435880 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms