RNA–Protein interactions for RNA: ENST00000435871.1

ACTBP12-201, Transcript of actin, beta pseudogene 12, humanhuman

BASIC

Gene ACTBP12, Length 418 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP12-201ENST00000435871 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
ACTBP12-201ENST00000435871 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
ACTBP12-201ENST00000435871 ABCC9O60706 1549 aa18.49■□□□□ 0.55
ACTBP12-201ENST00000435871 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
ACTBP12-201ENST00000435871 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
ACTBP12-201ENST00000435871 NACADO15069 1562 aa17.56■□□□□ 0.4
ACTBP12-201ENST00000435871 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
ACTBP12-201ENST00000435871 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
ACTBP12-201ENST00000435871 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
ACTBP12-201ENST00000435871 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
ACTBP12-201ENST00000435871 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.35
ACTBP12-201ENST00000435871 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
ACTBP12-201ENST00000435871 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
ACTBP12-201ENST00000435871 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
ACTBP12-201ENST00000435871 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
ACTBP12-201ENST00000435871 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
ACTBP12-201ENST00000435871 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
ACTBP12-201ENST00000435871 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
ACTBP12-201ENST00000435871 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
ACTBP12-201ENST00000435871 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
ACTBP12-201ENST00000435871 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
ACTBP12-201ENST00000435871 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
ACTBP12-201ENST00000435871 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
ACTBP12-201ENST00000435871 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
ACTBP12-201ENST00000435871 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
ACTBP12-201ENST00000435871 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
ACTBP12-201ENST00000435871 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
ACTBP12-201ENST00000435871 NESP48681 1621 aa15.95■□□□□ 0.14
ACTBP12-201ENST00000435871 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
ACTBP12-201ENST00000435871 WIZO95785 1651 aa15.89■□□□□ 0.13
ACTBP12-201ENST00000435871 CUX2O14529 1486 aa15.83■□□□□ 0.12
ACTBP12-201ENST00000435871 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
ACTBP12-201ENST00000435871 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
ACTBP12-201ENST00000435871 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
ACTBP12-201ENST00000435871 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
ACTBP12-201ENST00000435871 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
ACTBP12-201ENST00000435871 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
ACTBP12-201ENST00000435871 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.11
ACTBP12-201ENST00000435871 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
ACTBP12-201ENST00000435871 CFTRP13569 1480 aa15.6■□□□□ 0.09
ACTBP12-201ENST00000435871 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
ACTBP12-201ENST00000435871 FANCD2Q9BXW9 1451 aa15.56■□□□□ 0.08
ACTBP12-201ENST00000435871 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
ACTBP12-201ENST00000435871 WDR62O43379 1518 aa15.53■□□□□ 0.08
ACTBP12-201ENST00000435871 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
ACTBP12-201ENST00000435871 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
ACTBP12-201ENST00000435871 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
ACTBP12-201ENST00000435871 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
ACTBP12-201ENST00000435871 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
ACTBP12-201ENST00000435871 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
ACTBP12-201ENST00000435871 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
ACTBP12-201ENST00000435871 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
ACTBP12-201ENST00000435871 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
ACTBP12-201ENST00000435871 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
ACTBP12-201ENST00000435871 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
ACTBP12-201ENST00000435871 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
ACTBP12-201ENST00000435871 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.01
ACTBP12-201ENST00000435871 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
ACTBP12-201ENST00000435871 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
ACTBP12-201ENST00000435871 SOGA1O94964 1423 aa15.09■□□□□ 0.01
ACTBP12-201ENST00000435871 CUX1P39880 1505 aa15.09■□□□□ 0.01
ACTBP12-201ENST00000435871 TRIM41Q8WV44 630 aa15.08■□□□□ 0
ACTBP12-201ENST00000435871 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
ACTBP12-201ENST00000435871 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
ACTBP12-201ENST00000435871 CHD1O14646 1710 aa14.98□□□□□ -0.01
ACTBP12-201ENST00000435871 FBLN2P98095 1184 aa14.98□□□□□ -0.01
ACTBP12-201ENST00000435871 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
ACTBP12-201ENST00000435871 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
ACTBP12-201ENST00000435871 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
ACTBP12-201ENST00000435871 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
ACTBP12-201ENST00000435871 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
ACTBP12-201ENST00000435871 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
ACTBP12-201ENST00000435871 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
ACTBP12-201ENST00000435871 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
ACTBP12-201ENST00000435871 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
ACTBP12-201ENST00000435871 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
ACTBP12-201ENST00000435871 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
ACTBP12-201ENST00000435871 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
ACTBP12-201ENST00000435871 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
ACTBP12-201ENST00000435871 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
ACTBP12-201ENST00000435871 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
ACTBP12-201ENST00000435871 ABCA5Q8WWZ7 1642 aa14.85□□□□□ -0.03
ACTBP12-201ENST00000435871 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
ACTBP12-201ENST00000435871 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
ACTBP12-201ENST00000435871 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
ACTBP12-201ENST00000435871 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
ACTBP12-201ENST00000435871 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
ACTBP12-201ENST00000435871 GRIN2AQ12879 1464 aa14.73□□□□□ -0.05
ACTBP12-201ENST00000435871 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
ACTBP12-201ENST00000435871 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
ACTBP12-201ENST00000435871 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.06
ACTBP12-201ENST00000435871 NUP160Q12769 1436 aa14.67□□□□□ -0.06
ACTBP12-201ENST00000435871 CEP170Q5SW79 1584 aa14.67□□□□□ -0.06
ACTBP12-201ENST00000435871 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
ACTBP12-201ENST00000435871 IGF1RP08069 1367 aa14.61□□□□□ -0.07
ACTBP12-201ENST00000435871 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
ACTBP12-201ENST00000435871 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
ACTBP12-201ENST00000435871 KIF27Q86VH2 1401 aa14.58□□□□□ -0.07
ACTBP12-201ENST00000435871 JPH4Q96JJ6 628 aa14.56□□□□□ -0.08
ACTBP12-201ENST00000435871 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms