RNA–Protein interactions for RNA: ENST00000435408.1

AL645939.3-201, humanhuman

BASIC

Gene AL645939.3, Length 225 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL645939.3-201ENST00000435408 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
AL645939.3-201ENST00000435408 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
AL645939.3-201ENST00000435408 ABCC9O60706 1549 aa14.05□□□□□ -0.16
AL645939.3-201ENST00000435408 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
AL645939.3-201ENST00000435408 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
AL645939.3-201ENST00000435408 NACADO15069 1562 aa13.42□□□□□ -0.26
AL645939.3-201ENST00000435408 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
AL645939.3-201ENST00000435408 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
AL645939.3-201ENST00000435408 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
AL645939.3-201ENST00000435408 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
AL645939.3-201ENST00000435408 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
AL645939.3-201ENST00000435408 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
AL645939.3-201ENST00000435408 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
AL645939.3-201ENST00000435408 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
AL645939.3-201ENST00000435408 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
AL645939.3-201ENST00000435408 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
AL645939.3-201ENST00000435408 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
AL645939.3-201ENST00000435408 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
AL645939.3-201ENST00000435408 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
AL645939.3-201ENST00000435408 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
AL645939.3-201ENST00000435408 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
AL645939.3-201ENST00000435408 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
AL645939.3-201ENST00000435408 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
AL645939.3-201ENST00000435408 HMGXB3Q12766 1538 aa12.29□□□□□ -0.44
AL645939.3-201ENST00000435408 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
AL645939.3-201ENST00000435408 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
AL645939.3-201ENST00000435408 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
AL645939.3-201ENST00000435408 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
AL645939.3-201ENST00000435408 CUX2O14529 1486 aa12.1□□□□□ -0.47
AL645939.3-201ENST00000435408 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
AL645939.3-201ENST00000435408 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
AL645939.3-201ENST00000435408 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
AL645939.3-201ENST00000435408 NESP48681 1621 aa12.05□□□□□ -0.48
AL645939.3-201ENST00000435408 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
AL645939.3-201ENST00000435408 WIZO95785 1651 aa12.02□□□□□ -0.49
AL645939.3-201ENST00000435408 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
AL645939.3-201ENST00000435408 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
AL645939.3-201ENST00000435408 CFTRP13569 1480 aa11.91□□□□□ -0.5
AL645939.3-201ENST00000435408 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
AL645939.3-201ENST00000435408 CEP164Q9UPV0 1460 aa11.9□□□□□ -0.5
AL645939.3-201ENST00000435408 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
AL645939.3-201ENST00000435408 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
AL645939.3-201ENST00000435408 KIF21AQ7Z4S6 1674 aa11.86□□□□□ -0.51
AL645939.3-201ENST00000435408 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
AL645939.3-201ENST00000435408 WDR62O43379 1518 aa11.82□□□□□ -0.52
AL645939.3-201ENST00000435408 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
AL645939.3-201ENST00000435408 SUPT5HO00267 1087 aaKnown RBP11.72□□□□□ -0.53
AL645939.3-201ENST00000435408 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
AL645939.3-201ENST00000435408 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
AL645939.3-201ENST00000435408 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
AL645939.3-201ENST00000435408 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
AL645939.3-201ENST00000435408 TOPBP1Q92547 1522 aa11.65□□□□□ -0.55
AL645939.3-201ENST00000435408 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
AL645939.3-201ENST00000435408 SOGA1O94964 1423 aa11.55□□□□□ -0.56
AL645939.3-201ENST00000435408 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
AL645939.3-201ENST00000435408 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
AL645939.3-201ENST00000435408 FBLN2P98095 1184 aa11.51□□□□□ -0.57
AL645939.3-201ENST00000435408 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
AL645939.3-201ENST00000435408 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
AL645939.3-201ENST00000435408 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
AL645939.3-201ENST00000435408 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
AL645939.3-201ENST00000435408 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
AL645939.3-201ENST00000435408 TARBP1Q13395 1621 aaKnown RBP11.47□□□□□ -0.57
AL645939.3-201ENST00000435408 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
AL645939.3-201ENST00000435408 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
AL645939.3-201ENST00000435408 CHMP7Q8WUX9 453 aaPredicted RBP11.46□□□□□ -0.57
AL645939.3-201ENST00000435408 CUX1P39880 1505 aa11.45□□□□□ -0.58
AL645939.3-201ENST00000435408 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
AL645939.3-201ENST00000435408 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
AL645939.3-201ENST00000435408 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
AL645939.3-201ENST00000435408 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
AL645939.3-201ENST00000435408 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
AL645939.3-201ENST00000435408 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
AL645939.3-201ENST00000435408 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
AL645939.3-201ENST00000435408 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
AL645939.3-201ENST00000435408 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
AL645939.3-201ENST00000435408 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
AL645939.3-201ENST00000435408 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
AL645939.3-201ENST00000435408 CHD1O14646 1710 aa11.3□□□□□ -0.6
AL645939.3-201ENST00000435408 RIMBP3CA6NJZ7 1639 aa11.3□□□□□ -0.6
AL645939.3-201ENST00000435408 RIMBP3BA6NNM3 1639 aa11.3□□□□□ -0.6
AL645939.3-201ENST00000435408 RIMBP3Q9UFD9 1639 aa11.3□□□□□ -0.6
AL645939.3-201ENST00000435408 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
AL645939.3-201ENST00000435408 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
AL645939.3-201ENST00000435408 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
AL645939.3-201ENST00000435408 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
AL645939.3-201ENST00000435408 PBRM1Q86U86 1689 aa11.25□□□□□ -0.61
AL645939.3-201ENST00000435408 GRIN2AQ12879 1464 aa11.25□□□□□ -0.61
AL645939.3-201ENST00000435408 KIF27Q86VH2 1401 aa11.24□□□□□ -0.61
AL645939.3-201ENST00000435408 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
AL645939.3-201ENST00000435408 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
AL645939.3-201ENST00000435408 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
AL645939.3-201ENST00000435408 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
AL645939.3-201ENST00000435408 NUP160Q12769 1436 aa11.19□□□□□ -0.62
AL645939.3-201ENST00000435408 IGF1RP08069 1367 aa11.16□□□□□ -0.62
AL645939.3-201ENST00000435408 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
AL645939.3-201ENST00000435408 CEP170Q5SW79 1584 aa11.12□□□□□ -0.63
AL645939.3-201ENST00000435408 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
AL645939.3-201ENST00000435408 CARMIL1Q5VZK9 1371 aa11.12□□□□□ -0.63
AL645939.3-201ENST00000435408 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms