RNA–Protein interactions for RNA: ENST00000435307.1

ACKR1-203, Transcript of atypical chemokine receptor 1 (Duffy blood group), humanhuman

TSL 3

Gene ACKR1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR1-203ENST00000435307 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
ACKR1-203ENST00000435307 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
ACKR1-203ENST00000435307 ABCC9O60706 1549 aa24.24■■□□□ 1.47
ACKR1-203ENST00000435307 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
ACKR1-203ENST00000435307 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
ACKR1-203ENST00000435307 NACADO15069 1562 aa23.29■■□□□ 1.32
ACKR1-203ENST00000435307 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
ACKR1-203ENST00000435307 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
ACKR1-203ENST00000435307 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
ACKR1-203ENST00000435307 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
ACKR1-203ENST00000435307 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
ACKR1-203ENST00000435307 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
ACKR1-203ENST00000435307 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
ACKR1-203ENST00000435307 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
ACKR1-203ENST00000435307 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
ACKR1-203ENST00000435307 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
ACKR1-203ENST00000435307 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
ACKR1-203ENST00000435307 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
ACKR1-203ENST00000435307 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
ACKR1-203ENST00000435307 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
ACKR1-203ENST00000435307 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
ACKR1-203ENST00000435307 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
ACKR1-203ENST00000435307 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
ACKR1-203ENST00000435307 HMGXB3Q12766 1538 aa21.33■■□□□ 1
ACKR1-203ENST00000435307 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
ACKR1-203ENST00000435307 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
ACKR1-203ENST00000435307 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
ACKR1-203ENST00000435307 WIZO95785 1651 aa21.08■□□□□ 0.96
ACKR1-203ENST00000435307 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
ACKR1-203ENST00000435307 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
ACKR1-203ENST00000435307 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
ACKR1-203ENST00000435307 NESP48681 1621 aa20.88■□□□□ 0.93
ACKR1-203ENST00000435307 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
ACKR1-203ENST00000435307 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
ACKR1-203ENST00000435307 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
ACKR1-203ENST00000435307 CUX2O14529 1486 aa20.79■□□□□ 0.92
ACKR1-203ENST00000435307 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
ACKR1-203ENST00000435307 CFTRP13569 1480 aa20.66■□□□□ 0.9
ACKR1-203ENST00000435307 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
ACKR1-203ENST00000435307 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
ACKR1-203ENST00000435307 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
ACKR1-203ENST00000435307 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
ACKR1-203ENST00000435307 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
ACKR1-203ENST00000435307 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
ACKR1-203ENST00000435307 PRDM2Q13029 1718 aa20.54■□□□□ 0.88
ACKR1-203ENST00000435307 WDR62O43379 1518 aa20.46■□□□□ 0.87
ACKR1-203ENST00000435307 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
ACKR1-203ENST00000435307 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
ACKR1-203ENST00000435307 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
ACKR1-203ENST00000435307 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
ACKR1-203ENST00000435307 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
ACKR1-203ENST00000435307 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
ACKR1-203ENST00000435307 SOGA1O94964 1423 aa20.02■□□□□ 0.8
ACKR1-203ENST00000435307 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
ACKR1-203ENST00000435307 OSCARQ8IYS5 282 aa20■□□□□ 0.79
ACKR1-203ENST00000435307 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
ACKR1-203ENST00000435307 CUX1P39880 1505 aa19.97■□□□□ 0.79
ACKR1-203ENST00000435307 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
ACKR1-203ENST00000435307 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
ACKR1-203ENST00000435307 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
ACKR1-203ENST00000435307 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
ACKR1-203ENST00000435307 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
ACKR1-203ENST00000435307 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
ACKR1-203ENST00000435307 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.78
ACKR1-203ENST00000435307 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
ACKR1-203ENST00000435307 FBLN2P98095 1184 aa19.85■□□□□ 0.77
ACKR1-203ENST00000435307 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
ACKR1-203ENST00000435307 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
ACKR1-203ENST00000435307 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
ACKR1-203ENST00000435307 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
ACKR1-203ENST00000435307 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
ACKR1-203ENST00000435307 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
ACKR1-203ENST00000435307 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
ACKR1-203ENST00000435307 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
ACKR1-203ENST00000435307 CHD1O14646 1710 aa19.73■□□□□ 0.75
ACKR1-203ENST00000435307 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
ACKR1-203ENST00000435307 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
ACKR1-203ENST00000435307 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
ACKR1-203ENST00000435307 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
ACKR1-203ENST00000435307 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
ACKR1-203ENST00000435307 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
ACKR1-203ENST00000435307 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
ACKR1-203ENST00000435307 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
ACKR1-203ENST00000435307 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
ACKR1-203ENST00000435307 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
ACKR1-203ENST00000435307 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
ACKR1-203ENST00000435307 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
ACKR1-203ENST00000435307 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
ACKR1-203ENST00000435307 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
ACKR1-203ENST00000435307 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
ACKR1-203ENST00000435307 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
ACKR1-203ENST00000435307 CUL7Q14999 1698 aa19.41■□□□□ 0.7
ACKR1-203ENST00000435307 IGF1RP08069 1367 aa19.4■□□□□ 0.7
ACKR1-203ENST00000435307 NUP160Q12769 1436 aa19.39■□□□□ 0.69
ACKR1-203ENST00000435307 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
ACKR1-203ENST00000435307 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
ACKR1-203ENST00000435307 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
ACKR1-203ENST00000435307 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
ACKR1-203ENST00000435307 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
ACKR1-203ENST00000435307 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms