RNA–Protein interactions for RNA: ENST00000434439.1

CDK15-203, Transcript of cyclin dependent kinase 15, humanhuman

TSL 1 (best) BASIC

Gene CDK15, Length 2,240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK15-203ENST00000434439 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
CDK15-203ENST00000434439 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
CDK15-203ENST00000434439 ABCC9O60706 1549 aa16.92■□□□□ 0.3
CDK15-203ENST00000434439 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
CDK15-203ENST00000434439 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.19
CDK15-203ENST00000434439 NACADO15069 1562 aa16.18■□□□□ 0.18
CDK15-203ENST00000434439 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
CDK15-203ENST00000434439 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
CDK15-203ENST00000434439 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
CDK15-203ENST00000434439 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
CDK15-203ENST00000434439 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDK15-203ENST00000434439 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
CDK15-203ENST00000434439 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
CDK15-203ENST00000434439 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
CDK15-203ENST00000434439 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
CDK15-203ENST00000434439 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
CDK15-203ENST00000434439 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
CDK15-203ENST00000434439 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
CDK15-203ENST00000434439 SMARCA4P51532 1647 aa15.04■□□□□ -0
CDK15-203ENST00000434439 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
CDK15-203ENST00000434439 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
CDK15-203ENST00000434439 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.02
CDK15-203ENST00000434439 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
CDK15-203ENST00000434439 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
CDK15-203ENST00000434439 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
CDK15-203ENST00000434439 HMGXB3Q12766 1538 aa14.85□□□□□ -0.03
CDK15-203ENST00000434439 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
CDK15-203ENST00000434439 WIZO95785 1651 aa14.8□□□□□ -0.04
CDK15-203ENST00000434439 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
CDK15-203ENST00000434439 NESP48681 1621 aa14.66□□□□□ -0.06
CDK15-203ENST00000434439 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
CDK15-203ENST00000434439 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
CDK15-203ENST00000434439 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
CDK15-203ENST00000434439 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.09
CDK15-203ENST00000434439 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
CDK15-203ENST00000434439 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
CDK15-203ENST00000434439 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CDK15-203ENST00000434439 CFTRP13569 1480 aa14.42□□□□□ -0.1
CDK15-203ENST00000434439 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
CDK15-203ENST00000434439 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
CDK15-203ENST00000434439 CUX2O14529 1486 aa14.38□□□□□ -0.11
CDK15-203ENST00000434439 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
CDK15-203ENST00000434439 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
CDK15-203ENST00000434439 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
CDK15-203ENST00000434439 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
CDK15-203ENST00000434439 WDR62O43379 1518 aa14.27□□□□□ -0.13
CDK15-203ENST00000434439 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
CDK15-203ENST00000434439 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
CDK15-203ENST00000434439 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
CDK15-203ENST00000434439 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
CDK15-203ENST00000434439 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
CDK15-203ENST00000434439 CUX1P39880 1505 aa14.02□□□□□ -0.16
CDK15-203ENST00000434439 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
CDK15-203ENST00000434439 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
CDK15-203ENST00000434439 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
CDK15-203ENST00000434439 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
CDK15-203ENST00000434439 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
CDK15-203ENST00000434439 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
CDK15-203ENST00000434439 SOGA1O94964 1423 aa13.95□□□□□ -0.18
CDK15-203ENST00000434439 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDK15-203ENST00000434439 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
CDK15-203ENST00000434439 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
CDK15-203ENST00000434439 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
CDK15-203ENST00000434439 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
CDK15-203ENST00000434439 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
CDK15-203ENST00000434439 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
CDK15-203ENST00000434439 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
CDK15-203ENST00000434439 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
CDK15-203ENST00000434439 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
CDK15-203ENST00000434439 CHD1O14646 1710 aa13.79□□□□□ -0.2
CDK15-203ENST00000434439 GAPVD1Q14C86 1478 aa13.78□□□□□ -0.2
CDK15-203ENST00000434439 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.2
CDK15-203ENST00000434439 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
CDK15-203ENST00000434439 FBLN2P98095 1184 aa13.77□□□□□ -0.21
CDK15-203ENST00000434439 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
CDK15-203ENST00000434439 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
CDK15-203ENST00000434439 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
CDK15-203ENST00000434439 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
CDK15-203ENST00000434439 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
CDK15-203ENST00000434439 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
CDK15-203ENST00000434439 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
CDK15-203ENST00000434439 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
CDK15-203ENST00000434439 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
CDK15-203ENST00000434439 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
CDK15-203ENST00000434439 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
CDK15-203ENST00000434439 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
CDK15-203ENST00000434439 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
CDK15-203ENST00000434439 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
CDK15-203ENST00000434439 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
CDK15-203ENST00000434439 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
CDK15-203ENST00000434439 IGF1RP08069 1367 aa13.58□□□□□ -0.24
CDK15-203ENST00000434439 CEP170Q5SW79 1584 aa13.56□□□□□ -0.24
CDK15-203ENST00000434439 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
CDK15-203ENST00000434439 NUP160Q12769 1436 aa13.54□□□□□ -0.24
CDK15-203ENST00000434439 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
CDK15-203ENST00000434439 CUL7Q14999 1698 aa13.5□□□□□ -0.25
CDK15-203ENST00000434439 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
CDK15-203ENST00000434439 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
CDK15-203ENST00000434439 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
CDK15-203ENST00000434439 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms