RNA–Protein interactions for RNA: ENST00000434208.6

KCNMA1-214, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,055 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-214ENST00000434208 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
KCNMA1-214ENST00000434208 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
KCNMA1-214ENST00000434208 ABCC9O60706 1549 aa17.77■□□□□ 0.43
KCNMA1-214ENST00000434208 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-214ENST00000434208 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
KCNMA1-214ENST00000434208 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
KCNMA1-214ENST00000434208 NACADO15069 1562 aa17.35■□□□□ 0.37
KCNMA1-214ENST00000434208 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
KCNMA1-214ENST00000434208 UNC13AQ9UPW8 1703 aa17.19■□□□□ 0.34
KCNMA1-214ENST00000434208 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
KCNMA1-214ENST00000434208 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
KCNMA1-214ENST00000434208 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
KCNMA1-214ENST00000434208 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
KCNMA1-214ENST00000434208 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
KCNMA1-214ENST00000434208 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
KCNMA1-214ENST00000434208 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
KCNMA1-214ENST00000434208 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
KCNMA1-214ENST00000434208 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
KCNMA1-214ENST00000434208 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
KCNMA1-214ENST00000434208 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.18
KCNMA1-214ENST00000434208 BAZ1AQ9NRL2 1556 aaPredicted RBP16.1■□□□□ 0.17
KCNMA1-214ENST00000434208 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
KCNMA1-214ENST00000434208 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
KCNMA1-214ENST00000434208 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
KCNMA1-214ENST00000434208 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
KCNMA1-214ENST00000434208 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
KCNMA1-214ENST00000434208 WIZO95785 1651 aa15.93■□□□□ 0.14
KCNMA1-214ENST00000434208 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
KCNMA1-214ENST00000434208 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
KCNMA1-214ENST00000434208 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
KCNMA1-214ENST00000434208 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
KCNMA1-214ENST00000434208 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
KCNMA1-214ENST00000434208 NESP48681 1621 aa15.52■□□□□ 0.07
KCNMA1-214ENST00000434208 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
KCNMA1-214ENST00000434208 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
KCNMA1-214ENST00000434208 CFTRP13569 1480 aa15.46■□□□□ 0.07
KCNMA1-214ENST00000434208 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
KCNMA1-214ENST00000434208 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
KCNMA1-214ENST00000434208 WDR62O43379 1518 aa15.27■□□□□ 0.04
KCNMA1-214ENST00000434208 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.04
KCNMA1-214ENST00000434208 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
KCNMA1-214ENST00000434208 CUX2O14529 1486 aa15.21■□□□□ 0.03
KCNMA1-214ENST00000434208 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
KCNMA1-214ENST00000434208 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
KCNMA1-214ENST00000434208 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
KCNMA1-214ENST00000434208 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
KCNMA1-214ENST00000434208 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
KCNMA1-214ENST00000434208 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
KCNMA1-214ENST00000434208 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
KCNMA1-214ENST00000434208 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
KCNMA1-214ENST00000434208 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
KCNMA1-214ENST00000434208 CUX1P39880 1505 aa15.07■□□□□ 0
KCNMA1-214ENST00000434208 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
KCNMA1-214ENST00000434208 ABCC8Q09428 1581 aa15.04■□□□□ -0
KCNMA1-214ENST00000434208 TOP2BQ02880 1626 aa15□□□□□ -0.01
KCNMA1-214ENST00000434208 SYNJ1O43426 1573 aa15□□□□□ -0.01
KCNMA1-214ENST00000434208 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
KCNMA1-214ENST00000434208 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
KCNMA1-214ENST00000434208 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
KCNMA1-214ENST00000434208 EIF4G3O43432 1585 aaKnown RBP14.89□□□□□ -0.03
KCNMA1-214ENST00000434208 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
KCNMA1-214ENST00000434208 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
KCNMA1-214ENST00000434208 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
KCNMA1-214ENST00000434208 ABCA10Q8WWZ4 1543 aa14.84□□□□□ -0.03
KCNMA1-214ENST00000434208 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
KCNMA1-214ENST00000434208 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
KCNMA1-214ENST00000434208 SOGA1O94964 1423 aa14.78□□□□□ -0.04
KCNMA1-214ENST00000434208 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
KCNMA1-214ENST00000434208 CHD1O14646 1710 aa14.71□□□□□ -0.05
KCNMA1-214ENST00000434208 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
KCNMA1-214ENST00000434208 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
KCNMA1-214ENST00000434208 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
KCNMA1-214ENST00000434208 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
KCNMA1-214ENST00000434208 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
KCNMA1-214ENST00000434208 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
KCNMA1-214ENST00000434208 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
KCNMA1-214ENST00000434208 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
KCNMA1-214ENST00000434208 CUL7Q14999 1698 aa14.58□□□□□ -0.08
KCNMA1-214ENST00000434208 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
KCNMA1-214ENST00000434208 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
KCNMA1-214ENST00000434208 IGF1RP08069 1367 aa14.53□□□□□ -0.08
KCNMA1-214ENST00000434208 CEP170Q5SW79 1584 aa14.52□□□□□ -0.08
KCNMA1-214ENST00000434208 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
KCNMA1-214ENST00000434208 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
KCNMA1-214ENST00000434208 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
KCNMA1-214ENST00000434208 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
KCNMA1-214ENST00000434208 NUP160Q12769 1436 aa14.49□□□□□ -0.09
KCNMA1-214ENST00000434208 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
KCNMA1-214ENST00000434208 CHIC1Q5VXU3 224 aa14.47□□□□□ -0.09
KCNMA1-214ENST00000434208 KIF21BO75037 1637 aa14.45□□□□□ -0.1
KCNMA1-214ENST00000434208 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
KCNMA1-214ENST00000434208 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
KCNMA1-214ENST00000434208 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
KCNMA1-214ENST00000434208 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
KCNMA1-214ENST00000434208 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
KCNMA1-214ENST00000434208 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
KCNMA1-214ENST00000434208 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
KCNMA1-214ENST00000434208 ARHGEF11O15085 1522 aa14.35□□□□□ -0.11
KCNMA1-214ENST00000434208 EEA1Q15075 1411 aa14.35□□□□□ -0.11
KCNMA1-214ENST00000434208 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms