RNA–Protein interactions for RNA: ENST00000434095.2

PTPA-217, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-217ENST00000434095 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
PTPA-217ENST00000434095 ABCC9O60706 1549 aa32.71■■■□□ 2.83
PTPA-217ENST00000434095 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
PTPA-217ENST00000434095 RB1CC1Q8TDY2 1594 aa31.04■■■□□ 2.56
PTPA-217ENST00000434095 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
PTPA-217ENST00000434095 NACADO15069 1562 aa30.75■■■□□ 2.51
PTPA-217ENST00000434095 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
PTPA-217ENST00000434095 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
PTPA-217ENST00000434095 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
PTPA-217ENST00000434095 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
PTPA-217ENST00000434095 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
PTPA-217ENST00000434095 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
PTPA-217ENST00000434095 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
PTPA-217ENST00000434095 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
PTPA-217ENST00000434095 SCRIBQ14160 1630 aa29.62■■■□□ 2.33
PTPA-217ENST00000434095 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
PTPA-217ENST00000434095 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
PTPA-217ENST00000434095 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
PTPA-217ENST00000434095 DNAJC5Q9H3Z4 198 aa28.46■■■□□ 2.15
PTPA-217ENST00000434095 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
PTPA-217ENST00000434095 CUX2O14529 1486 aa28.27■■■□□ 2.12
PTPA-217ENST00000434095 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
PTPA-217ENST00000434095 ERCC6Q03468 1493 aa28.25■■■□□ 2.11
PTPA-217ENST00000434095 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
PTPA-217ENST00000434095 SMARCA2P51531 1590 aa28.2■■■□□ 2.1
PTPA-217ENST00000434095 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
PTPA-217ENST00000434095 NESP48681 1621 aa28.03■■■□□ 2.08
PTPA-217ENST00000434095 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
PTPA-217ENST00000434095 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
PTPA-217ENST00000434095 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
PTPA-217ENST00000434095 THOC2Q8NI27 1593 aaKnown RBP27.84■■■□□ 2.05
PTPA-217ENST00000434095 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
PTPA-217ENST00000434095 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
PTPA-217ENST00000434095 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
PTPA-217ENST00000434095 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
PTPA-217ENST00000434095 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
PTPA-217ENST00000434095 WIZO95785 1651 aa27.48■■□□□ 1.99
PTPA-217ENST00000434095 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
PTPA-217ENST00000434095 WDR62O43379 1518 aa27.39■■□□□ 1.98
PTPA-217ENST00000434095 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
PTPA-217ENST00000434095 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
PTPA-217ENST00000434095 CFTRP13569 1480 aa27.15■■□□□ 1.94
PTPA-217ENST00000434095 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
PTPA-217ENST00000434095 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
PTPA-217ENST00000434095 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
PTPA-217ENST00000434095 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
PTPA-217ENST00000434095 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
PTPA-217ENST00000434095 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
PTPA-217ENST00000434095 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
PTPA-217ENST00000434095 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
PTPA-217ENST00000434095 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
PTPA-217ENST00000434095 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
PTPA-217ENST00000434095 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
PTPA-217ENST00000434095 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
PTPA-217ENST00000434095 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
PTPA-217ENST00000434095 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
PTPA-217ENST00000434095 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
PTPA-217ENST00000434095 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
PTPA-217ENST00000434095 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
PTPA-217ENST00000434095 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
PTPA-217ENST00000434095 CHD1O14646 1710 aa26.44■■□□□ 1.82
PTPA-217ENST00000434095 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.823e-7■■■■■ 30.5
PTPA-217ENST00000434095 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
PTPA-217ENST00000434095 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
PTPA-217ENST00000434095 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
PTPA-217ENST00000434095 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
PTPA-217ENST00000434095 FBLN2P98095 1184 aa26.26■■□□□ 1.79
PTPA-217ENST00000434095 SOGA1O94964 1423 aa26.23■■□□□ 1.79
PTPA-217ENST00000434095 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
PTPA-217ENST00000434095 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
PTPA-217ENST00000434095 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
PTPA-217ENST00000434095 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PTPA-217ENST00000434095 CUX1P39880 1505 aa26.14■■□□□ 1.78
PTPA-217ENST00000434095 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
PTPA-217ENST00000434095 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
PTPA-217ENST00000434095 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
PTPA-217ENST00000434095 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
PTPA-217ENST00000434095 TRHP20396 242 aaPredicted RBP26.06■■□□□ 1.76
PTPA-217ENST00000434095 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
PTPA-217ENST00000434095 SYNJ2O15056 1496 aa26■■□□□ 1.75
PTPA-217ENST00000434095 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
PTPA-217ENST00000434095 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
PTPA-217ENST00000434095 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
PTPA-217ENST00000434095 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
PTPA-217ENST00000434095 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
PTPA-217ENST00000434095 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
PTPA-217ENST00000434095 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
PTPA-217ENST00000434095 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.711e-6■■□□□ 12
PTPA-217ENST00000434095 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
PTPA-217ENST00000434095 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
PTPA-217ENST00000434095 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
PTPA-217ENST00000434095 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
PTPA-217ENST00000434095 NUP160Q12769 1436 aa25.65■■□□□ 1.7
PTPA-217ENST00000434095 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
PTPA-217ENST00000434095 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
PTPA-217ENST00000434095 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
PTPA-217ENST00000434095 AEBP2Q6ZN18 517 aaPredicted RBP25.47■■□□□ 1.67
PTPA-217ENST00000434095 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
PTPA-217ENST00000434095 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
PTPA-217ENST00000434095 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms