RNA–Protein interactions for RNA: ENST00000434095.2

PTPA-217, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-217ENST00000434095 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.071e-39■■■■■ 113.4
PTPA-217ENST00000434095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.96■□□□□ 0.477e-19■■□□□ 11.8
PTPA-217ENST00000434095 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.373e-18■■■■■ 56.9
PTPA-217ENST00000434095 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.029e-17■■■■■ 189.1
PTPA-217ENST00000434095 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.279e-16■□□□□ 10
PTPA-217ENST00000434095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.314e-10■■■■■ 77.9
PTPA-217ENST00000434095 DDX6P26196 483 aaKnown RBP eCLIP15.34■□□□□ 0.055e-10■□□□□ 8.6
PTPA-217ENST00000434095 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.325e-9■□□□□ 8.6
PTPA-217ENST00000434095 PCBP1Q15365 356 aaKnown RBP eCLIP15.85■□□□□ 0.132e-8■■■■■ 49.8
PTPA-217ENST00000434095 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.86□□□□□ -0.516e-8■□□□□ 9
PTPA-217ENST00000434095 YBX3P16989 372 aaKnown RBP eCLIP19.92■□□□□ 0.789e-8■□□□□ 11.1
PTPA-217ENST00000434095 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■■■□ 24.1
PTPA-217ENST00000434095 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.823e-7■■■■■ 30.5
PTPA-217ENST00000434095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.8■□□□□ 0.124e-7■■□□□ 11.7
PTPA-217ENST00000434095 PTBP1P26599 531 aaKnown RBP eCLIP11.11□□□□□ -0.634e-7■■■□□ 15.4
PTPA-217ENST00000434095 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.49□□□□□ -0.099e-7■□□□□ 9.3
PTPA-217ENST00000434095 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.711e-6■■□□□ 12
PTPA-217ENST00000434095 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■■□□ 15.7
PTPA-217ENST00000434095 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■□ 22
PTPA-217ENST00000434095 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■□□ 17.4
PTPA-217ENST00000434095 RPS3P23396 243 aaKnown RBP eCLIP13.83□□□□□ -0.24e-6■■■■□ 22.8
PTPA-217ENST00000434095 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.136e-6■■■■□ 22.2
PTPA-217ENST00000434095 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.167e-6■■■□□ 18.7
PTPA-217ENST00000434095 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.229e-6■□□□□ 8.1
PTPA-217ENST00000434095 RBFOX2O43251 390 aaKnown RBP eCLIP11□□□□□ -0.651e-5■■■■□ 19.7
Retrieved 25 of 25 RNA–protein pairs in 15.1 ms