RNA–Protein interactions for RNA: ENST00000433814.5

PCGF3-206, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-206ENST00000433814 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
PCGF3-206ENST00000433814 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
PCGF3-206ENST00000433814 ABCC9O60706 1549 aa34.45■■■■□ 3.11
PCGF3-206ENST00000433814 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
PCGF3-206ENST00000433814 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
PCGF3-206ENST00000433814 NACADO15069 1562 aa32.58■■■□□ 2.81
PCGF3-206ENST00000433814 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
PCGF3-206ENST00000433814 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
PCGF3-206ENST00000433814 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
PCGF3-206ENST00000433814 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
PCGF3-206ENST00000433814 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
PCGF3-206ENST00000433814 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
PCGF3-206ENST00000433814 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
PCGF3-206ENST00000433814 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
PCGF3-206ENST00000433814 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
PCGF3-206ENST00000433814 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
PCGF3-206ENST00000433814 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
PCGF3-206ENST00000433814 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
PCGF3-206ENST00000433814 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
PCGF3-206ENST00000433814 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
PCGF3-206ENST00000433814 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
PCGF3-206ENST00000433814 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
PCGF3-206ENST00000433814 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
PCGF3-206ENST00000433814 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
PCGF3-206ENST00000433814 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
PCGF3-206ENST00000433814 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.35
PCGF3-206ENST00000433814 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
PCGF3-206ENST00000433814 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
PCGF3-206ENST00000433814 NESP48681 1621 aa29.64■■■□□ 2.34
PCGF3-206ENST00000433814 CUX2O14529 1486 aa29.51■■■□□ 2.31
PCGF3-206ENST00000433814 WIZO95785 1651 aa29.45■■■□□ 2.31
PCGF3-206ENST00000433814 LAMC3Q9Y6N6 1575 aa29.38■■■□□ 2.29
PCGF3-206ENST00000433814 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
PCGF3-206ENST00000433814 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
PCGF3-206ENST00000433814 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
PCGF3-206ENST00000433814 PDS5BQ9NTI5 1447 aa29.22■■■□□ 2.27
PCGF3-206ENST00000433814 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
PCGF3-206ENST00000433814 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
PCGF3-206ENST00000433814 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
PCGF3-206ENST00000433814 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
PCGF3-206ENST00000433814 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
PCGF3-206ENST00000433814 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
PCGF3-206ENST00000433814 CFTRP13569 1480 aa28.88■■■□□ 2.21
PCGF3-206ENST00000433814 WDR62O43379 1518 aa28.86■■■□□ 2.21
PCGF3-206ENST00000433814 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
PCGF3-206ENST00000433814 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
PCGF3-206ENST00000433814 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
PCGF3-206ENST00000433814 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
PCGF3-206ENST00000433814 IFT140Q96RY7 1462 aa28.29■■■□□ 2.12
PCGF3-206ENST00000433814 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
PCGF3-206ENST00000433814 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
PCGF3-206ENST00000433814 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
PCGF3-206ENST00000433814 ABCC8Q09428 1581 aa28.26■■■□□ 2.11
PCGF3-206ENST00000433814 DNMBPQ6XZF7 1577 aa28.25■■■□□ 2.11
PCGF3-206ENST00000433814 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
PCGF3-206ENST00000433814 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
PCGF3-206ENST00000433814 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
PCGF3-206ENST00000433814 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.083e-10■■■■■ 32.7
PCGF3-206ENST00000433814 POLA1P09884 1462 aaPredicted RBP28.07■■■□□ 2.08
PCGF3-206ENST00000433814 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
PCGF3-206ENST00000433814 SOGA1O94964 1423 aa27.98■■■□□ 2.07
PCGF3-206ENST00000433814 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.06
PCGF3-206ENST00000433814 CUX1P39880 1505 aa27.94■■■□□ 2.06
PCGF3-206ENST00000433814 FBLN2P98095 1184 aa27.93■■■□□ 2.06
PCGF3-206ENST00000433814 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
PCGF3-206ENST00000433814 CHD1O14646 1710 aa27.92■■■□□ 2.06
PCGF3-206ENST00000433814 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.06
PCGF3-206ENST00000433814 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.06
PCGF3-206ENST00000433814 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.06
PCGF3-206ENST00000433814 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
PCGF3-206ENST00000433814 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
PCGF3-206ENST00000433814 WDR97A6NE52 1622 aa27.73■■■□□ 2.03
PCGF3-206ENST00000433814 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
PCGF3-206ENST00000433814 GRIN2BQ13224 1484 aa27.68■■■□□ 2.02
PCGF3-206ENST00000433814 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
PCGF3-206ENST00000433814 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.01
PCGF3-206ENST00000433814 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.01
PCGF3-206ENST00000433814 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
PCGF3-206ENST00000433814 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
PCGF3-206ENST00000433814 SYNJ2O15056 1496 aa27.57■■■□□ 2
PCGF3-206ENST00000433814 SYNJ1O43426 1573 aa27.54■■■□□ 2
PCGF3-206ENST00000433814 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
PCGF3-206ENST00000433814 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
PCGF3-206ENST00000433814 ARAP1Q96P48 1450 aa27.53■■■□□ 2
PCGF3-206ENST00000433814 TOP2BQ02880 1626 aa27.52■■■□□ 2
PCGF3-206ENST00000433814 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
PCGF3-206ENST00000433814 CLASP1Q7Z460 1538 aa27.51■■■□□ 2
PCGF3-206ENST00000433814 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
PCGF3-206ENST00000433814 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
PCGF3-206ENST00000433814 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
PCGF3-206ENST00000433814 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
PCGF3-206ENST00000433814 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
PCGF3-206ENST00000433814 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
PCGF3-206ENST00000433814 NUP160Q12769 1436 aa27.2■■□□□ 1.94
PCGF3-206ENST00000433814 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
PCGF3-206ENST00000433814 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
PCGF3-206ENST00000433814 KIF27Q86VH2 1401 aa27■■□□□ 1.91
PCGF3-206ENST00000433814 JPH4Q96JJ6 628 aa27■■□□□ 1.91
PCGF3-206ENST00000433814 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-206ENST00000433814 IGF1RP08069 1367 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms