RNA–Protein interactions for RNA: ENST00000433456.1

RNF144A-204, Transcript of ring finger protein 144A, humanhuman

TSL 3

Gene RNF144A, Length 392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-204ENST00000433456 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
RNF144A-204ENST00000433456 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
RNF144A-204ENST00000433456 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
RNF144A-204ENST00000433456 ABCC9O60706 1549 aa13.93□□□□□ -0.18
RNF144A-204ENST00000433456 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
RNF144A-204ENST00000433456 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
RNF144A-204ENST00000433456 NACADO15069 1562 aa13.73□□□□□ -0.21
RNF144A-204ENST00000433456 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
RNF144A-204ENST00000433456 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
RNF144A-204ENST00000433456 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
RNF144A-204ENST00000433456 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
RNF144A-204ENST00000433456 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
RNF144A-204ENST00000433456 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
RNF144A-204ENST00000433456 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
RNF144A-204ENST00000433456 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
RNF144A-204ENST00000433456 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF144A-204ENST00000433456 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
RNF144A-204ENST00000433456 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
RNF144A-204ENST00000433456 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
RNF144A-204ENST00000433456 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
RNF144A-204ENST00000433456 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
RNF144A-204ENST00000433456 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
RNF144A-204ENST00000433456 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
RNF144A-204ENST00000433456 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
RNF144A-204ENST00000433456 WIZO95785 1651 aa12.77□□□□□ -0.36
RNF144A-204ENST00000433456 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
RNF144A-204ENST00000433456 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
RNF144A-204ENST00000433456 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
RNF144A-204ENST00000433456 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
RNF144A-204ENST00000433456 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
RNF144A-204ENST00000433456 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
RNF144A-204ENST00000433456 BAZ1BQ9UIG0 1483 aaKnown RBP12.61□□□□□ -0.39
RNF144A-204ENST00000433456 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
RNF144A-204ENST00000433456 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
RNF144A-204ENST00000433456 CFTRP13569 1480 aa12.33□□□□□ -0.44
RNF144A-204ENST00000433456 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
RNF144A-204ENST00000433456 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
RNF144A-204ENST00000433456 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
RNF144A-204ENST00000433456 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
RNF144A-204ENST00000433456 NESP48681 1621 aa12.2□□□□□ -0.46
RNF144A-204ENST00000433456 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
RNF144A-204ENST00000433456 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
RNF144A-204ENST00000433456 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
RNF144A-204ENST00000433456 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
RNF144A-204ENST00000433456 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
RNF144A-204ENST00000433456 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
RNF144A-204ENST00000433456 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
RNF144A-204ENST00000433456 TOP2BQ02880 1626 aa12.1□□□□□ -0.47
RNF144A-204ENST00000433456 CUX1P39880 1505 aa12.09□□□□□ -0.47
RNF144A-204ENST00000433456 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.47
RNF144A-204ENST00000433456 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
RNF144A-204ENST00000433456 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
RNF144A-204ENST00000433456 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
RNF144A-204ENST00000433456 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
RNF144A-204ENST00000433456 EEA1Q15075 1411 aa12.01□□□□□ -0.49
RNF144A-204ENST00000433456 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
RNF144A-204ENST00000433456 WDR62O43379 1518 aa12□□□□□ -0.49
RNF144A-204ENST00000433456 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.49
RNF144A-204ENST00000433456 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
RNF144A-204ENST00000433456 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
RNF144A-204ENST00000433456 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
RNF144A-204ENST00000433456 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
RNF144A-204ENST00000433456 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
RNF144A-204ENST00000433456 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
RNF144A-204ENST00000433456 ABCA10Q8WWZ4 1543 aa11.89□□□□□ -0.51
RNF144A-204ENST00000433456 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
RNF144A-204ENST00000433456 CUX2O14529 1486 aa11.89□□□□□ -0.51
RNF144A-204ENST00000433456 SOGA1O94964 1423 aa11.87□□□□□ -0.51
RNF144A-204ENST00000433456 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
RNF144A-204ENST00000433456 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
RNF144A-204ENST00000433456 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
RNF144A-204ENST00000433456 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
RNF144A-204ENST00000433456 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
RNF144A-204ENST00000433456 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
RNF144A-204ENST00000433456 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
RNF144A-204ENST00000433456 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
RNF144A-204ENST00000433456 KIF21BO75037 1637 aa11.78□□□□□ -0.52
RNF144A-204ENST00000433456 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
RNF144A-204ENST00000433456 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
RNF144A-204ENST00000433456 TNIKQ9UKE5 1360 aa11.75□□□□□ -0.53
RNF144A-204ENST00000433456 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
RNF144A-204ENST00000433456 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
RNF144A-204ENST00000433456 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
RNF144A-204ENST00000433456 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
RNF144A-204ENST00000433456 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
RNF144A-204ENST00000433456 PBRM1Q86U86 1689 aa11.73□□□□□ -0.53
RNF144A-204ENST00000433456 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
RNF144A-204ENST00000433456 CUL7Q14999 1698 aa11.72□□□□□ -0.53
RNF144A-204ENST00000433456 IGF1RP08069 1367 aa11.72□□□□□ -0.53
RNF144A-204ENST00000433456 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
RNF144A-204ENST00000433456 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
RNF144A-204ENST00000433456 AQRO60306 1485 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF144A-204ENST00000433456 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
RNF144A-204ENST00000433456 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
RNF144A-204ENST00000433456 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
RNF144A-204ENST00000433456 MAGI1Q96QZ7 1491 aaPredicted RBP11.64□□□□□ -0.55
RNF144A-204ENST00000433456 CARMIL1Q5VZK9 1371 aa11.64□□□□□ -0.55
RNF144A-204ENST00000433456 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
RNF144A-204ENST00000433456 FHAD1B1AJZ9 1412 aa11.62□□□□□ -0.55
RNF144A-204ENST00000433456 HRCP23327 699 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms