RNA–Protein interactions for RNA: ENST00000433241.5

UBE2F-208, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-208ENST00000433241 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
UBE2F-208ENST00000433241 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
UBE2F-208ENST00000433241 ABCC9O60706 1549 aa21.69■■□□□ 1.06
UBE2F-208ENST00000433241 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
UBE2F-208ENST00000433241 NACADO15069 1562 aa20.84■□□□□ 0.93
UBE2F-208ENST00000433241 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
UBE2F-208ENST00000433241 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
UBE2F-208ENST00000433241 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
UBE2F-208ENST00000433241 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
UBE2F-208ENST00000433241 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
UBE2F-208ENST00000433241 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
UBE2F-208ENST00000433241 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
UBE2F-208ENST00000433241 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
UBE2F-208ENST00000433241 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
UBE2F-208ENST00000433241 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
UBE2F-208ENST00000433241 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
UBE2F-208ENST00000433241 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
UBE2F-208ENST00000433241 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
UBE2F-208ENST00000433241 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
UBE2F-208ENST00000433241 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
UBE2F-208ENST00000433241 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
UBE2F-208ENST00000433241 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
UBE2F-208ENST00000433241 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
UBE2F-208ENST00000433241 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
UBE2F-208ENST00000433241 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
UBE2F-208ENST00000433241 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
UBE2F-208ENST00000433241 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
UBE2F-208ENST00000433241 WIZO95785 1651 aa18.96■□□□□ 0.63
UBE2F-208ENST00000433241 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
UBE2F-208ENST00000433241 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
UBE2F-208ENST00000433241 NESP48681 1621 aa18.76■□□□□ 0.59
UBE2F-208ENST00000433241 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
UBE2F-208ENST00000433241 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
UBE2F-208ENST00000433241 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
UBE2F-208ENST00000433241 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
UBE2F-208ENST00000433241 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
UBE2F-208ENST00000433241 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
UBE2F-208ENST00000433241 CUX2O14529 1486 aa18.56■□□□□ 0.56
UBE2F-208ENST00000433241 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
UBE2F-208ENST00000433241 CFTRP13569 1480 aa18.52■□□□□ 0.55
UBE2F-208ENST00000433241 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
UBE2F-208ENST00000433241 PRDM2Q13029 1718 aa18.48■□□□□ 0.55
UBE2F-208ENST00000433241 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
UBE2F-208ENST00000433241 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.54
UBE2F-208ENST00000433241 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
UBE2F-208ENST00000433241 WDR62O43379 1518 aa18.38■□□□□ 0.53
UBE2F-208ENST00000433241 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
UBE2F-208ENST00000433241 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
UBE2F-208ENST00000433241 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
UBE2F-208ENST00000433241 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
UBE2F-208ENST00000433241 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
UBE2F-208ENST00000433241 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
UBE2F-208ENST00000433241 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
UBE2F-208ENST00000433241 CUX1P39880 1505 aa17.97■□□□□ 0.47
UBE2F-208ENST00000433241 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
UBE2F-208ENST00000433241 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
UBE2F-208ENST00000433241 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
UBE2F-208ENST00000433241 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
UBE2F-208ENST00000433241 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
UBE2F-208ENST00000433241 SOGA1O94964 1423 aa17.86■□□□□ 0.45
UBE2F-208ENST00000433241 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
UBE2F-208ENST00000433241 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.45
UBE2F-208ENST00000433241 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■■■□□ 18.3
UBE2F-208ENST00000433241 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
UBE2F-208ENST00000433241 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
UBE2F-208ENST00000433241 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
UBE2F-208ENST00000433241 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
UBE2F-208ENST00000433241 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
UBE2F-208ENST00000433241 CHD1O14646 1710 aa17.72■□□□□ 0.43
UBE2F-208ENST00000433241 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
UBE2F-208ENST00000433241 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
UBE2F-208ENST00000433241 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
UBE2F-208ENST00000433241 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
UBE2F-208ENST00000433241 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
UBE2F-208ENST00000433241 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
UBE2F-208ENST00000433241 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
UBE2F-208ENST00000433241 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
UBE2F-208ENST00000433241 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
UBE2F-208ENST00000433241 FBLN2P98095 1184 aa17.54■□□□□ 0.4
UBE2F-208ENST00000433241 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
UBE2F-208ENST00000433241 RIMBP3CA6NJZ7 1639 aa17.53■□□□□ 0.4
UBE2F-208ENST00000433241 RIMBP3BA6NNM3 1639 aa17.53■□□□□ 0.4
UBE2F-208ENST00000433241 RIMBP3Q9UFD9 1639 aa17.53■□□□□ 0.4
UBE2F-208ENST00000433241 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
UBE2F-208ENST00000433241 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.39
UBE2F-208ENST00000433241 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
UBE2F-208ENST00000433241 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
UBE2F-208ENST00000433241 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
UBE2F-208ENST00000433241 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
UBE2F-208ENST00000433241 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
UBE2F-208ENST00000433241 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
UBE2F-208ENST00000433241 NUP160Q12769 1436 aa17.39■□□□□ 0.38
UBE2F-208ENST00000433241 CUL7Q14999 1698 aa17.38■□□□□ 0.37
UBE2F-208ENST00000433241 IGF1RP08069 1367 aa17.36■□□□□ 0.37
UBE2F-208ENST00000433241 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
UBE2F-208ENST00000433241 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
UBE2F-208ENST00000433241 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
UBE2F-208ENST00000433241 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
UBE2F-208ENST00000433241 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
UBE2F-208ENST00000433241 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms