RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 NISCHQ9Y2I1 1504 aa44.11■■■■■ 4.65
CNOT9-204ENST00000432877 ABCC9O60706 1549 aa39.81■■■■□ 3.96
CNOT9-204ENST00000432877 CCDC180Q9P1Z9 1646 aa39.57■■■■□ 3.92
CNOT9-204ENST00000432877 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
CNOT9-204ENST00000432877 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
CNOT9-204ENST00000432877 NACADO15069 1562 aa37.58■■■■□ 3.61
CNOT9-204ENST00000432877 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
CNOT9-204ENST00000432877 PABPN1Q86U42 306 aaKnown RBP eCLIP37.11■■■■□ 3.53
CNOT9-204ENST00000432877 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.53
CNOT9-204ENST00000432877 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
CNOT9-204ENST00000432877 BICRAQ9NZM4 1560 aa36.67■■■■□ 3.46
CNOT9-204ENST00000432877 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
CNOT9-204ENST00000432877 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
CNOT9-204ENST00000432877 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
CNOT9-204ENST00000432877 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
CNOT9-204ENST00000432877 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
CNOT9-204ENST00000432877 CC2D2AQ9P2K1 1620 aa35.92■■■■□ 3.34
CNOT9-204ENST00000432877 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
CNOT9-204ENST00000432877 DNAJC5Q9H3Z4 198 aa34.79■■■■□ 3.16
CNOT9-204ENST00000432877 NCAPD3P42695 1498 aa34.76■■■■□ 3.15
CNOT9-204ENST00000432877 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
CNOT9-204ENST00000432877 CUX2O14529 1486 aa34.5■■■■□ 3.11
CNOT9-204ENST00000432877 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
CNOT9-204ENST00000432877 SMARCA2P51531 1590 aa34.45■■■■□ 3.1
CNOT9-204ENST00000432877 HMGXB3Q12766 1538 aa34.38■■■■□ 3.09
CNOT9-204ENST00000432877 SMARCA4P51532 1647 aa34.37■■■■□ 3.09
CNOT9-204ENST00000432877 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
CNOT9-204ENST00000432877 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.06
CNOT9-204ENST00000432877 NESP48681 1621 aa34.11■■■■□ 3.05
CNOT9-204ENST00000432877 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
CNOT9-204ENST00000432877 MROH2BQ7Z745 1585 aa33.93■■■■□ 3.02
CNOT9-204ENST00000432877 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
CNOT9-204ENST00000432877 PDS5BQ9NTI5 1447 aa33.84■■■■□ 3.01
CNOT9-204ENST00000432877 THOC2Q8NI27 1593 aaKnown RBP33.76■■■□□ 2.99
CNOT9-204ENST00000432877 CADPSQ9ULU8 1353 aa33.71■■■□□ 2.99
CNOT9-204ENST00000432877 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
CNOT9-204ENST00000432877 MRC2Q9UBG0 1479 aa33.46■■■□□ 2.95
CNOT9-204ENST00000432877 WIZO95785 1651 aa33.43■■■□□ 2.94
CNOT9-204ENST00000432877 WDR62O43379 1518 aa33.35■■■□□ 2.93
CNOT9-204ENST00000432877 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
CNOT9-204ENST00000432877 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
CNOT9-204ENST00000432877 CFTRP13569 1480 aa33.24■■■□□ 2.91
CNOT9-204ENST00000432877 FANCD2Q9BXW9 1451 aa33.23■■■□□ 2.91
CNOT9-204ENST00000432877 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
CNOT9-204ENST00000432877 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
CNOT9-204ENST00000432877 OSCARQ8IYS5 282 aa33■■■□□ 2.87
CNOT9-204ENST00000432877 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
CNOT9-204ENST00000432877 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
CNOT9-204ENST00000432877 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
CNOT9-204ENST00000432877 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
CNOT9-204ENST00000432877 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
CNOT9-204ENST00000432877 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
CNOT9-204ENST00000432877 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
CNOT9-204ENST00000432877 DNMBPQ6XZF7 1577 aa32.4■■■□□ 2.78
CNOT9-204ENST00000432877 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
CNOT9-204ENST00000432877 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
CNOT9-204ENST00000432877 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
CNOT9-204ENST00000432877 AQRO60306 1485 aaKnown RBP eCLIP32.28■■■□□ 2.765e-8■■■■■ 56.9
CNOT9-204ENST00000432877 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
CNOT9-204ENST00000432877 ARHGEF11O15085 1522 aa32.27■■■□□ 2.76
CNOT9-204ENST00000432877 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
CNOT9-204ENST00000432877 POLA1P09884 1462 aaPredicted RBP32.21■■■□□ 2.75
CNOT9-204ENST00000432877 CYB5RLQ6IPT4 315 aa32.17■■■□□ 2.74
CNOT9-204ENST00000432877 FBLN2P98095 1184 aa32.16■■■□□ 2.74
CNOT9-204ENST00000432877 SOGA1O94964 1423 aa32.15■■■□□ 2.74
CNOT9-204ENST00000432877 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
CNOT9-204ENST00000432877 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.73
CNOT9-204ENST00000432877 CHD1O14646 1710 aa32■■■□□ 2.71
CNOT9-204ENST00000432877 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
CNOT9-204ENST00000432877 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
CNOT9-204ENST00000432877 CHMP7Q8WUX9 453 aaPredicted RBP31.96■■■□□ 2.71
CNOT9-204ENST00000432877 ARAP1Q96P48 1450 aa31.94■■■□□ 2.7
CNOT9-204ENST00000432877 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
CNOT9-204ENST00000432877 CUX1P39880 1505 aa31.89■■■□□ 2.7
CNOT9-204ENST00000432877 TRHP20396 242 aaPredicted RBP31.88■■■□□ 2.69
CNOT9-204ENST00000432877 MAGI1Q96QZ7 1491 aaPredicted RBP31.88■■■□□ 2.69
CNOT9-204ENST00000432877 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
CNOT9-204ENST00000432877 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
CNOT9-204ENST00000432877 SYNJ1O43426 1573 aa31.77■■■□□ 2.68
CNOT9-204ENST00000432877 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
CNOT9-204ENST00000432877 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
CNOT9-204ENST00000432877 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
CNOT9-204ENST00000432877 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
CNOT9-204ENST00000432877 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
CNOT9-204ENST00000432877 ABCA5Q8WWZ7 1642 aa31.5■■■□□ 2.63
CNOT9-204ENST00000432877 PBRM1Q86U86 1689 aa31.5■■■□□ 2.63
CNOT9-204ENST00000432877 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
CNOT9-204ENST00000432877 NUP160Q12769 1436 aa31.35■■■□□ 2.61
CNOT9-204ENST00000432877 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
CNOT9-204ENST00000432877 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
CNOT9-204ENST00000432877 ADAMTS12P58397 1594 aa31.28■■■□□ 2.6
CNOT9-204ENST00000432877 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
CNOT9-204ENST00000432877 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
CNOT9-204ENST00000432877 CEP170Q5SW79 1584 aa31.22■■■□□ 2.59
CNOT9-204ENST00000432877 ERCC6L2Q5T890 1561 aa31.19■■■□□ 2.58
CNOT9-204ENST00000432877 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
CNOT9-204ENST00000432877 JPH4Q96JJ6 628 aa31.13■■■□□ 2.57
CNOT9-204ENST00000432877 SHROOM2Q13796 1616 aa31.13■■■□□ 2.57
CNOT9-204ENST00000432877 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.56
CNOT9-204ENST00000432877 NPM1P06748 294 aaKnown RBP eCLIP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms