RNA–Protein interactions for RNA: ENST00000432066.2

SP4-202, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-202ENST00000432066 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
SP4-202ENST00000432066 ABCC9O60706 1549 aa35.85■■■■□ 3.33
SP4-202ENST00000432066 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
SP4-202ENST00000432066 DNAJC5BQ9UF47 199 aa34.03■■■■□ 3.04
SP4-202ENST00000432066 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
SP4-202ENST00000432066 DCAF8L2P0C7V8 631 aa33.79■■■■□ 3
SP4-202ENST00000432066 NACADO15069 1562 aa33.68■■■□□ 2.98
SP4-202ENST00000432066 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
SP4-202ENST00000432066 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
SP4-202ENST00000432066 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
SP4-202ENST00000432066 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
SP4-202ENST00000432066 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
SP4-202ENST00000432066 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
SP4-202ENST00000432066 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
SP4-202ENST00000432066 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
SP4-202ENST00000432066 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
SP4-202ENST00000432066 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
SP4-202ENST00000432066 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
SP4-202ENST00000432066 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
SP4-202ENST00000432066 CUX2O14529 1486 aa31.14■■■□□ 2.57
SP4-202ENST00000432066 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
SP4-202ENST00000432066 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
SP4-202ENST00000432066 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
SP4-202ENST00000432066 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
SP4-202ENST00000432066 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
SP4-202ENST00000432066 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
SP4-202ENST00000432066 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
SP4-202ENST00000432066 BAZ1BQ9UIG0 1483 aaKnown RBP30.78■■■□□ 2.52
SP4-202ENST00000432066 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
SP4-202ENST00000432066 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
SP4-202ENST00000432066 NESP48681 1621 aa30.62■■■□□ 2.49
SP4-202ENST00000432066 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
SP4-202ENST00000432066 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
SP4-202ENST00000432066 WIZO95785 1651 aa30.3■■■□□ 2.44
SP4-202ENST00000432066 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
SP4-202ENST00000432066 CADPSQ9ULU8 1353 aa30.25■■■□□ 2.43
SP4-202ENST00000432066 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
SP4-202ENST00000432066 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
SP4-202ENST00000432066 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
SP4-202ENST00000432066 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
SP4-202ENST00000432066 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
SP4-202ENST00000432066 CFTRP13569 1480 aa29.89■■■□□ 2.38
SP4-202ENST00000432066 WDR62O43379 1518 aa29.89■■■□□ 2.38
SP4-202ENST00000432066 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
SP4-202ENST00000432066 CEP164Q9UPV0 1460 aa29.86■■■□□ 2.37
SP4-202ENST00000432066 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
SP4-202ENST00000432066 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
SP4-202ENST00000432066 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
SP4-202ENST00000432066 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
SP4-202ENST00000432066 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
SP4-202ENST00000432066 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
SP4-202ENST00000432066 IFT140Q96RY7 1462 aa29.28■■■□□ 2.28
SP4-202ENST00000432066 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
SP4-202ENST00000432066 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
SP4-202ENST00000432066 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
SP4-202ENST00000432066 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
SP4-202ENST00000432066 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
SP4-202ENST00000432066 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
SP4-202ENST00000432066 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
SP4-202ENST00000432066 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
SP4-202ENST00000432066 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
SP4-202ENST00000432066 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.232e-11■■■■■ 58.5
SP4-202ENST00000432066 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
SP4-202ENST00000432066 SOGA1O94964 1423 aa28.96■■■□□ 2.23
SP4-202ENST00000432066 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
SP4-202ENST00000432066 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
SP4-202ENST00000432066 TRHP20396 242 aaPredicted RBP28.9■■■□□ 2.22
SP4-202ENST00000432066 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
SP4-202ENST00000432066 FBLN2P98095 1184 aa28.87■■■□□ 2.21
SP4-202ENST00000432066 CHD1O14646 1710 aa28.86■■■□□ 2.21
SP4-202ENST00000432066 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
SP4-202ENST00000432066 CUX1P39880 1505 aa28.84■■■□□ 2.21
SP4-202ENST00000432066 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
SP4-202ENST00000432066 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
SP4-202ENST00000432066 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
SP4-202ENST00000432066 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
SP4-202ENST00000432066 GRIN2BQ13224 1484 aa28.65■■■□□ 2.18
SP4-202ENST00000432066 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
SP4-202ENST00000432066 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
SP4-202ENST00000432066 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
SP4-202ENST00000432066 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
SP4-202ENST00000432066 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
SP4-202ENST00000432066 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
SP4-202ENST00000432066 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
SP4-202ENST00000432066 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
SP4-202ENST00000432066 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
SP4-202ENST00000432066 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.13
SP4-202ENST00000432066 PBRM1Q86U86 1689 aa28.36■■■□□ 2.13
SP4-202ENST00000432066 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
SP4-202ENST00000432066 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
SP4-202ENST00000432066 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
SP4-202ENST00000432066 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
SP4-202ENST00000432066 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
SP4-202ENST00000432066 NUP160Q12769 1436 aa28.14■■■□□ 2.1
SP4-202ENST00000432066 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
SP4-202ENST00000432066 KIF27Q86VH2 1401 aa28■■■□□ 2.07
SP4-202ENST00000432066 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
SP4-202ENST00000432066 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
SP4-202ENST00000432066 IGF1RP08069 1367 aa27.96■■■□□ 2.07
SP4-202ENST00000432066 PRG4Q92954 1404 aaPredicted RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms