RNA–Protein interactions for RNA: ENST00000431925.6

ARRDC1-203, Transcript of arrestin domain containing 1, humanhuman

TSL 3

Gene ARRDC1, Length 555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-203ENST00000431925 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
ARRDC1-203ENST00000431925 ABCC9O60706 1549 aa40.65■■■■■ 4.1
ARRDC1-203ENST00000431925 CCDC180Q9P1Z9 1646 aa40.54■■■■■ 4.08
ARRDC1-203ENST00000431925 RB1CC1Q8TDY2 1594 aa38.61■■■■□ 3.77
ARRDC1-203ENST00000431925 NACADO15069 1562 aa38.36■■■■□ 3.73
ARRDC1-203ENST00000431925 DNAJC5BQ9UF47 199 aa38.25■■■■□ 3.71
ARRDC1-203ENST00000431925 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
ARRDC1-203ENST00000431925 PABPN1Q86U42 306 aaKnown RBP eCLIP37.89■■■■□ 3.66
ARRDC1-203ENST00000431925 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
ARRDC1-203ENST00000431925 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
ARRDC1-203ENST00000431925 BICRAQ9NZM4 1560 aa37.58■■■■□ 3.61
ARRDC1-203ENST00000431925 ZCCHC6Q5VYS8 1495 aaKnown RBP37.52■■■■□ 3.6
ARRDC1-203ENST00000431925 DCAF1Q9Y4B6 1507 aa37.37■■■■□ 3.57
ARRDC1-203ENST00000431925 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
ARRDC1-203ENST00000431925 SHROOM4Q9ULL8 1493 aa36.98■■■■□ 3.51
ARRDC1-203ENST00000431925 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
ARRDC1-203ENST00000431925 EIF4G1Q04637 1599 aaKnown RBP36.61■■■■□ 3.45
ARRDC1-203ENST00000431925 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
ARRDC1-203ENST00000431925 NCAPD3P42695 1498 aa35.48■■■■□ 3.27
ARRDC1-203ENST00000431925 ATAD2BQ9ULI0 1458 aa35.37■■■■□ 3.25
ARRDC1-203ENST00000431925 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
ARRDC1-203ENST00000431925 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
ARRDC1-203ENST00000431925 HMGXB3Q12766 1538 aa35.16■■■■□ 3.22
ARRDC1-203ENST00000431925 BAZ1AQ9NRL2 1556 aaPredicted RBP35.1■■■■□ 3.21
ARRDC1-203ENST00000431925 DNAJC5Q9H3Z4 198 aa35.05■■■■□ 3.2
ARRDC1-203ENST00000431925 ERCC6Q03468 1493 aa35.04■■■■□ 3.2
ARRDC1-203ENST00000431925 BAZ1BQ9UIG0 1483 aaKnown RBP34.99■■■■□ 3.19
ARRDC1-203ENST00000431925 CUX2O14529 1486 aa34.98■■■■□ 3.19
ARRDC1-203ENST00000431925 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
ARRDC1-203ENST00000431925 NESP48681 1621 aa34.95■■■■□ 3.18
ARRDC1-203ENST00000431925 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
ARRDC1-203ENST00000431925 LAMC3Q9Y6N6 1575 aa34.62■■■■□ 3.13
ARRDC1-203ENST00000431925 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
ARRDC1-203ENST00000431925 WIZO95785 1651 aa34.46■■■■□ 3.11
ARRDC1-203ENST00000431925 PDS5BQ9NTI5 1447 aa34.43■■■■□ 3.1
ARRDC1-203ENST00000431925 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
ARRDC1-203ENST00000431925 CADPSQ9ULU8 1353 aa34.4■■■■□ 3.1
ARRDC1-203ENST00000431925 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
ARRDC1-203ENST00000431925 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
ARRDC1-203ENST00000431925 WDR62O43379 1518 aa34.07■■■■□ 3.04
ARRDC1-203ENST00000431925 TOP2AP11388 1531 aaKnown RBP34.01■■■■□ 3.04
ARRDC1-203ENST00000431925 CFTRP13569 1480 aa34.01■■■■□ 3.03
ARRDC1-203ENST00000431925 FANCD2Q9BXW9 1451 aa34■■■■□ 3.03
ARRDC1-203ENST00000431925 CEP164Q9UPV0 1460 aa34■■■■□ 3.03
ARRDC1-203ENST00000431925 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
ARRDC1-203ENST00000431925 CCDC88BA6NC98 1476 aa33.68■■■□□ 2.98
ARRDC1-203ENST00000431925 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
ARRDC1-203ENST00000431925 TRIM41Q8WV44 630 aa33.48■■■□□ 2.95
ARRDC1-203ENST00000431925 OSCARQ8IYS5 282 aa33.42■■■□□ 2.94
ARRDC1-203ENST00000431925 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
ARRDC1-203ENST00000431925 ZNF608Q9ULD9 1512 aaPredicted RBP33.34■■■□□ 2.93
ARRDC1-203ENST00000431925 IFT140Q96RY7 1462 aa33.32■■■□□ 2.92
ARRDC1-203ENST00000431925 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
ARRDC1-203ENST00000431925 DNMBPQ6XZF7 1577 aa33.2■■■□□ 2.91
ARRDC1-203ENST00000431925 EIF4G3O43432 1585 aaKnown RBP33.09■■■□□ 2.89
ARRDC1-203ENST00000431925 TARBP1Q13395 1621 aaKnown RBP33.06■■■□□ 2.88
ARRDC1-203ENST00000431925 AQRO60306 1485 aaKnown RBP eCLIP33.04■■■□□ 2.882e-10■■■■■ 40
ARRDC1-203ENST00000431925 POLA1P09884 1462 aaPredicted RBP33.02■■■□□ 2.88
ARRDC1-203ENST00000431925 RIMBP3CA6NJZ7 1639 aa32.96■■■□□ 2.87
ARRDC1-203ENST00000431925 RIMBP3BA6NNM3 1639 aa32.96■■■□□ 2.87
ARRDC1-203ENST00000431925 RIMBP3Q9UFD9 1639 aa32.96■■■□□ 2.87
ARRDC1-203ENST00000431925 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
ARRDC1-203ENST00000431925 ARHGEF11O15085 1522 aa32.88■■■□□ 2.85
ARRDC1-203ENST00000431925 SOGA1O94964 1423 aa32.87■■■□□ 2.85
ARRDC1-203ENST00000431925 TDRD9Q8NDG6 1382 aaKnown RBP32.84■■■□□ 2.85
ARRDC1-203ENST00000431925 CHD1O14646 1710 aa32.81■■■□□ 2.84
ARRDC1-203ENST00000431925 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
ARRDC1-203ENST00000431925 CUX1P39880 1505 aa32.79■■■□□ 2.84
ARRDC1-203ENST00000431925 FBLN2P98095 1184 aa32.78■■■□□ 2.84
ARRDC1-203ENST00000431925 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
ARRDC1-203ENST00000431925 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
ARRDC1-203ENST00000431925 SNAPC4Q5SXM2 1469 aa32.66■■■□□ 2.82
ARRDC1-203ENST00000431925 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
ARRDC1-203ENST00000431925 ARAP1Q96P48 1450 aa32.58■■■□□ 2.81
ARRDC1-203ENST00000431925 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
ARRDC1-203ENST00000431925 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
ARRDC1-203ENST00000431925 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
ARRDC1-203ENST00000431925 CLASP1Q7Z460 1538 aa32.49■■■□□ 2.79
ARRDC1-203ENST00000431925 SYNJ2O15056 1496 aa32.46■■■□□ 2.79
ARRDC1-203ENST00000431925 GAPVD1Q14C86 1478 aa32.45■■■□□ 2.79
ARRDC1-203ENST00000431925 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
ARRDC1-203ENST00000431925 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
ARRDC1-203ENST00000431925 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
ARRDC1-203ENST00000431925 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
ARRDC1-203ENST00000431925 WRNQ14191 1432 aaPredicted RBP eCLIP32.3■■■□□ 2.76
ARRDC1-203ENST00000431925 TRHP20396 242 aaPredicted RBP32.26■■■□□ 2.75
ARRDC1-203ENST00000431925 TOP2BQ02880 1626 aa32.22■■■□□ 2.75
ARRDC1-203ENST00000431925 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
ARRDC1-203ENST00000431925 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
ARRDC1-203ENST00000431925 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
ARRDC1-203ENST00000431925 NUP160Q12769 1436 aa32.06■■■□□ 2.72
ARRDC1-203ENST00000431925 CEP170Q5SW79 1584 aa32.04■■■□□ 2.72
ARRDC1-203ENST00000431925 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
ARRDC1-203ENST00000431925 ERCC6L2Q5T890 1561 aa32.03■■■□□ 2.72
ARRDC1-203ENST00000431925 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
ARRDC1-203ENST00000431925 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
ARRDC1-203ENST00000431925 PRG4Q92954 1404 aaPredicted RBP31.75■■■□□ 2.67
ARRDC1-203ENST00000431925 JPH4Q96JJ6 628 aa31.74■■■□□ 2.67
ARRDC1-203ENST00000431925 IGF1RP08069 1367 aa31.67■■■□□ 2.66
ARRDC1-203ENST00000431925 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms