RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
AC055876.3-201ENST00000431496 CCDC180Q9P1Z9 1646 aa35.99■■■■□ 3.35
AC055876.3-201ENST00000431496 ABCC9O60706 1549 aa35.94■■■■□ 3.34
AC055876.3-201ENST00000431496 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
AC055876.3-201ENST00000431496 NACADO15069 1562 aa34.06■■■■□ 3.04
AC055876.3-201ENST00000431496 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
AC055876.3-201ENST00000431496 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
AC055876.3-201ENST00000431496 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
AC055876.3-201ENST00000431496 PABPN1Q86U42 306 aaKnown RBP eCLIP33.56■■■□□ 2.96
AC055876.3-201ENST00000431496 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
AC055876.3-201ENST00000431496 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
AC055876.3-201ENST00000431496 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
AC055876.3-201ENST00000431496 BICRAQ9NZM4 1560 aa33.25■■■□□ 2.91
AC055876.3-201ENST00000431496 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
AC055876.3-201ENST00000431496 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
AC055876.3-201ENST00000431496 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
AC055876.3-201ENST00000431496 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
AC055876.3-201ENST00000431496 CECR2Q9BXF3 1484 aa32.38■■■□□ 2.77
AC055876.3-201ENST00000431496 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
AC055876.3-201ENST00000431496 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
AC055876.3-201ENST00000431496 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
AC055876.3-201ENST00000431496 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
AC055876.3-201ENST00000431496 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
AC055876.3-201ENST00000431496 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
AC055876.3-201ENST00000431496 BAZ1BQ9UIG0 1483 aaKnown RBP31.07■■■□□ 2.56
AC055876.3-201ENST00000431496 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
AC055876.3-201ENST00000431496 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
AC055876.3-201ENST00000431496 ERCC6Q03468 1493 aa31.01■■■□□ 2.56
AC055876.3-201ENST00000431496 NESP48681 1621 aa30.91■■■□□ 2.54
AC055876.3-201ENST00000431496 CUX2O14529 1486 aa30.91■■■□□ 2.54
AC055876.3-201ENST00000431496 DNAJC5Q9H3Z4 198 aa30.86■■■□□ 2.53
AC055876.3-201ENST00000431496 LAMC3Q9Y6N6 1575 aa30.69■■■□□ 2.5
AC055876.3-201ENST00000431496 WIZO95785 1651 aa30.62■■■□□ 2.49
AC055876.3-201ENST00000431496 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
AC055876.3-201ENST00000431496 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
AC055876.3-201ENST00000431496 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
AC055876.3-201ENST00000431496 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
AC055876.3-201ENST00000431496 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
AC055876.3-201ENST00000431496 MRC2Q9UBG0 1479 aa30.26■■■□□ 2.44
AC055876.3-201ENST00000431496 TOP2AP11388 1531 aaKnown RBP30.25■■■□□ 2.43
AC055876.3-201ENST00000431496 CFTRP13569 1480 aa30.2■■■□□ 2.43
AC055876.3-201ENST00000431496 FANCD2Q9BXW9 1451 aa30.16■■■□□ 2.42
AC055876.3-201ENST00000431496 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
AC055876.3-201ENST00000431496 WDR62O43379 1518 aa30.16■■■□□ 2.42
AC055876.3-201ENST00000431496 CCDC88BA6NC98 1476 aa29.97■■■□□ 2.39
AC055876.3-201ENST00000431496 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
AC055876.3-201ENST00000431496 PRDM2Q13029 1718 aa29.78■■■□□ 2.36
AC055876.3-201ENST00000431496 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
AC055876.3-201ENST00000431496 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
AC055876.3-201ENST00000431496 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
AC055876.3-201ENST00000431496 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
AC055876.3-201ENST00000431496 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
AC055876.3-201ENST00000431496 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.32
AC055876.3-201ENST00000431496 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
AC055876.3-201ENST00000431496 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
AC055876.3-201ENST00000431496 TARBP1Q13395 1621 aaKnown RBP29.3■■■□□ 2.28
AC055876.3-201ENST00000431496 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
AC055876.3-201ENST00000431496 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
AC055876.3-201ENST00000431496 SUPT5HO00267 1087 aaKnown RBP29.26■■■□□ 2.27
AC055876.3-201ENST00000431496 SOGA1O94964 1423 aa29.22■■■□□ 2.27
AC055876.3-201ENST00000431496 RAD54L2Q9Y4B4 1467 aa29.22■■■□□ 2.27
AC055876.3-201ENST00000431496 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
AC055876.3-201ENST00000431496 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
AC055876.3-201ENST00000431496 CUX1P39880 1505 aa29.13■■■□□ 2.25
AC055876.3-201ENST00000431496 FBLN2P98095 1184 aa29.11■■■□□ 2.25
AC055876.3-201ENST00000431496 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
AC055876.3-201ENST00000431496 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
AC055876.3-201ENST00000431496 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
AC055876.3-201ENST00000431496 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
AC055876.3-201ENST00000431496 CHD1O14646 1710 aa29.03■■■□□ 2.24
AC055876.3-201ENST00000431496 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
AC055876.3-201ENST00000431496 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
AC055876.3-201ENST00000431496 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
AC055876.3-201ENST00000431496 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
AC055876.3-201ENST00000431496 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
AC055876.3-201ENST00000431496 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.22
AC055876.3-201ENST00000431496 GAPVD1Q14C86 1478 aa28.84■■■□□ 2.21
AC055876.3-201ENST00000431496 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
AC055876.3-201ENST00000431496 SYNJ2O15056 1496 aa28.8■■■□□ 2.2
AC055876.3-201ENST00000431496 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
AC055876.3-201ENST00000431496 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
AC055876.3-201ENST00000431496 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
AC055876.3-201ENST00000431496 SYNJ1O43426 1573 aa28.74■■■□□ 2.19
AC055876.3-201ENST00000431496 PBRM1Q86U86 1689 aa28.71■■■□□ 2.19
AC055876.3-201ENST00000431496 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
AC055876.3-201ENST00000431496 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
AC055876.3-201ENST00000431496 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
AC055876.3-201ENST00000431496 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
AC055876.3-201ENST00000431496 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
AC055876.3-201ENST00000431496 FHAD1B1AJZ9 1412 aa28.49■■■□□ 2.15
AC055876.3-201ENST00000431496 ADAMTS12P58397 1594 aa28.48■■■□□ 2.15
AC055876.3-201ENST00000431496 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.15
AC055876.3-201ENST00000431496 NUP160Q12769 1436 aa28.44■■■□□ 2.14
AC055876.3-201ENST00000431496 CEP170Q5SW79 1584 aa28.39■■■□□ 2.14
AC055876.3-201ENST00000431496 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.12
AC055876.3-201ENST00000431496 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
AC055876.3-201ENST00000431496 JPH4Q96JJ6 628 aa28.24■■■□□ 2.11
AC055876.3-201ENST00000431496 IGF1RP08069 1367 aa28.21■■■□□ 2.11
AC055876.3-201ENST00000431496 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
AC055876.3-201ENST00000431496 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms