RNA–Protein interactions for RNA: ENST00000431481.1

SMTN-208, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-208ENST00000431481 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
SMTN-208ENST00000431481 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
SMTN-208ENST00000431481 ABCC9O60706 1549 aa38.48■■■■□ 3.75
SMTN-208ENST00000431481 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
SMTN-208ENST00000431481 NACADO15069 1562 aa36.56■■■■□ 3.44
SMTN-208ENST00000431481 DCAF8L2P0C7V8 631 aa36.23■■■■□ 3.39
SMTN-208ENST00000431481 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
SMTN-208ENST00000431481 DNAJC5BQ9UF47 199 aa35.99■■■■□ 3.35
SMTN-208ENST00000431481 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
SMTN-208ENST00000431481 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
SMTN-208ENST00000431481 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
SMTN-208ENST00000431481 DCAF1Q9Y4B6 1507 aa35.64■■■■□ 3.3
SMTN-208ENST00000431481 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
SMTN-208ENST00000431481 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
SMTN-208ENST00000431481 SCRIBQ14160 1630 aa35.07■■■■□ 3.21
SMTN-208ENST00000431481 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
SMTN-208ENST00000431481 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
SMTN-208ENST00000431481 CECR2Q9BXF3 1484 aa34.74■■■■□ 3.15
SMTN-208ENST00000431481 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
SMTN-208ENST00000431481 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
SMTN-208ENST00000431481 SMARCA2P51531 1590 aa33.56■■■□□ 2.96
SMTN-208ENST00000431481 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
SMTN-208ENST00000431481 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
SMTN-208ENST00000431481 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
SMTN-208ENST00000431481 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
SMTN-208ENST00000431481 CUX2O14529 1486 aa33.32■■■□□ 2.92
SMTN-208ENST00000431481 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
SMTN-208ENST00000431481 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
SMTN-208ENST00000431481 DNAJC5Q9H3Z4 198 aa33.2■■■□□ 2.91
SMTN-208ENST00000431481 MROH2BQ7Z745 1585 aa33.06■■■□□ 2.88
SMTN-208ENST00000431481 NESP48681 1621 aa33.02■■■□□ 2.88
SMTN-208ENST00000431481 LAMC3Q9Y6N6 1575 aa32.97■■■□□ 2.87
SMTN-208ENST00000431481 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
SMTN-208ENST00000431481 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
SMTN-208ENST00000431481 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.82
SMTN-208ENST00000431481 WIZO95785 1651 aa32.63■■■□□ 2.81
SMTN-208ENST00000431481 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
SMTN-208ENST00000431481 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
SMTN-208ENST00000431481 RSF1Q96T23 1441 aaPredicted RBP32.44■■■□□ 2.78
SMTN-208ENST00000431481 WDR62O43379 1518 aa32.37■■■□□ 2.77
SMTN-208ENST00000431481 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
SMTN-208ENST00000431481 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
SMTN-208ENST00000431481 CFTRP13569 1480 aa32.32■■■□□ 2.76
SMTN-208ENST00000431481 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
SMTN-208ENST00000431481 URB2Q14146 1524 aaKnown RBP31.96■■■□□ 2.71
SMTN-208ENST00000431481 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
SMTN-208ENST00000431481 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
SMTN-208ENST00000431481 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
SMTN-208ENST00000431481 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
SMTN-208ENST00000431481 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
SMTN-208ENST00000431481 TRIM41Q8WV44 630 aa31.67■■■□□ 2.66
SMTN-208ENST00000431481 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
SMTN-208ENST00000431481 DNMBPQ6XZF7 1577 aa31.58■■■□□ 2.65
SMTN-208ENST00000431481 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
SMTN-208ENST00000431481 EIF4G3O43432 1585 aaKnown RBP31.41■■■□□ 2.62
SMTN-208ENST00000431481 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
SMTN-208ENST00000431481 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
SMTN-208ENST00000431481 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.61e-7■■■□□ 18.8
SMTN-208ENST00000431481 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
SMTN-208ENST00000431481 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
SMTN-208ENST00000431481 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
SMTN-208ENST00000431481 SOGA1O94964 1423 aa31.23■■■□□ 2.59
SMTN-208ENST00000431481 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
SMTN-208ENST00000431481 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
SMTN-208ENST00000431481 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
SMTN-208ENST00000431481 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.57
SMTN-208ENST00000431481 CHD1O14646 1710 aa31.12■■■□□ 2.57
SMTN-208ENST00000431481 FBLN2P98095 1184 aa31.11■■■□□ 2.57
SMTN-208ENST00000431481 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
SMTN-208ENST00000431481 CUX1P39880 1505 aa31.08■■■□□ 2.57
SMTN-208ENST00000431481 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.56
SMTN-208ENST00000431481 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
SMTN-208ENST00000431481 SNAPC4Q5SXM2 1469 aa30.99■■■□□ 2.55
SMTN-208ENST00000431481 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
SMTN-208ENST00000431481 CYB5RLQ6IPT4 315 aa30.95■■■□□ 2.55
SMTN-208ENST00000431481 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
SMTN-208ENST00000431481 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
SMTN-208ENST00000431481 SYNJ2O15056 1496 aa30.89■■■□□ 2.53
SMTN-208ENST00000431481 ARAP1Q96P48 1450 aa30.86■■■□□ 2.53
SMTN-208ENST00000431481 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
SMTN-208ENST00000431481 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
SMTN-208ENST00000431481 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
SMTN-208ENST00000431481 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
SMTN-208ENST00000431481 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
SMTN-208ENST00000431481 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
SMTN-208ENST00000431481 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
SMTN-208ENST00000431481 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
SMTN-208ENST00000431481 TRHP20396 242 aaPredicted RBP30.62■■■□□ 2.49
SMTN-208ENST00000431481 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
SMTN-208ENST00000431481 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
SMTN-208ENST00000431481 FHAD1B1AJZ9 1412 aa30.5■■■□□ 2.47
SMTN-208ENST00000431481 ERICH3Q5RHP9 1530 aa30.49■■■□□ 2.47
SMTN-208ENST00000431481 NUP160Q12769 1436 aa30.47■■■□□ 2.47
SMTN-208ENST00000431481 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
SMTN-208ENST00000431481 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
SMTN-208ENST00000431481 ERCC6L2Q5T890 1561 aa30.23■■■□□ 2.43
SMTN-208ENST00000431481 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
SMTN-208ENST00000431481 PRG4Q92954 1404 aaPredicted RBP30.14■■■□□ 2.42
SMTN-208ENST00000431481 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
SMTN-208ENST00000431481 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms