RNA–Protein interactions for RNA: ENST00000431277.5

SNX5-204, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-204ENST00000431277 NISCHQ9Y2I1 1504 aa38.76■■■■□ 3.8
SNX5-204ENST00000431277 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
SNX5-204ENST00000431277 ABCC9O60706 1549 aa34.1■■■■□ 3.05
SNX5-204ENST00000431277 DCAF8L2P0C7V8 631 aa32.72■■■□□ 2.83
SNX5-204ENST00000431277 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
SNX5-204ENST00000431277 NACADO15069 1562 aa32.56■■■□□ 2.8
SNX5-204ENST00000431277 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
SNX5-204ENST00000431277 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
SNX5-204ENST00000431277 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.72
SNX5-204ENST00000431277 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
SNX5-204ENST00000431277 PABPN1Q86U42 306 aaKnown RBP eCLIP31.83■■■□□ 2.69
SNX5-204ENST00000431277 SCRIBQ14160 1630 aa31.64■■■□□ 2.65
SNX5-204ENST00000431277 BICRAQ9NZM4 1560 aa31.61■■■□□ 2.65
SNX5-204ENST00000431277 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
SNX5-204ENST00000431277 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
SNX5-204ENST00000431277 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
SNX5-204ENST00000431277 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
SNX5-204ENST00000431277 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
SNX5-204ENST00000431277 SMARCA4P51532 1647 aa30.17■■■□□ 2.42
SNX5-204ENST00000431277 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
SNX5-204ENST00000431277 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
SNX5-204ENST00000431277 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
SNX5-204ENST00000431277 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
SNX5-204ENST00000431277 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
SNX5-204ENST00000431277 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
SNX5-204ENST00000431277 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
SNX5-204ENST00000431277 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
SNX5-204ENST00000431277 WIZO95785 1651 aa29.63■■■□□ 2.33
SNX5-204ENST00000431277 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
SNX5-204ENST00000431277 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
SNX5-204ENST00000431277 NESP48681 1621 aa29.41■■■□□ 2.3
SNX5-204ENST00000431277 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
SNX5-204ENST00000431277 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
SNX5-204ENST00000431277 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
SNX5-204ENST00000431277 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
SNX5-204ENST00000431277 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
SNX5-204ENST00000431277 CUX2O14529 1486 aa29.11■■■□□ 2.25
SNX5-204ENST00000431277 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
SNX5-204ENST00000431277 CFTRP13569 1480 aa28.9■■■□□ 2.22
SNX5-204ENST00000431277 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
SNX5-204ENST00000431277 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
SNX5-204ENST00000431277 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
SNX5-204ENST00000431277 PRDM2Q13029 1718 aa28.84■■■□□ 2.21
SNX5-204ENST00000431277 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
SNX5-204ENST00000431277 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
SNX5-204ENST00000431277 WDR62O43379 1518 aa28.71■■■□□ 2.19
SNX5-204ENST00000431277 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
SNX5-204ENST00000431277 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
SNX5-204ENST00000431277 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
SNX5-204ENST00000431277 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
SNX5-204ENST00000431277 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.12
SNX5-204ENST00000431277 IFT140Q96RY7 1462 aa28.23■■■□□ 2.11
SNX5-204ENST00000431277 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
SNX5-204ENST00000431277 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
SNX5-204ENST00000431277 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
SNX5-204ENST00000431277 CUX1P39880 1505 aa28.05■■■□□ 2.08
SNX5-204ENST00000431277 TARBP1Q13395 1621 aaKnown RBP28.04■■■□□ 2.08
SNX5-204ENST00000431277 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
SNX5-204ENST00000431277 SOGA1O94964 1423 aa28.01■■■□□ 2.08
SNX5-204ENST00000431277 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
SNX5-204ENST00000431277 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.071e-7■■■■□ 19.9
SNX5-204ENST00000431277 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
SNX5-204ENST00000431277 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
SNX5-204ENST00000431277 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
SNX5-204ENST00000431277 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
SNX5-204ENST00000431277 FBLN2P98095 1184 aa27.81■■■□□ 2.04
SNX5-204ENST00000431277 CHD1O14646 1710 aa27.81■■■□□ 2.04
SNX5-204ENST00000431277 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
SNX5-204ENST00000431277 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
SNX5-204ENST00000431277 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
SNX5-204ENST00000431277 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
SNX5-204ENST00000431277 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.03
SNX5-204ENST00000431277 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
SNX5-204ENST00000431277 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
SNX5-204ENST00000431277 GAPVD1Q14C86 1478 aa27.68■■■□□ 2.02
SNX5-204ENST00000431277 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.01
SNX5-204ENST00000431277 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
SNX5-204ENST00000431277 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
SNX5-204ENST00000431277 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
SNX5-204ENST00000431277 SYNJ2O15056 1496 aa27.53■■■□□ 2
SNX5-204ENST00000431277 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
SNX5-204ENST00000431277 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
SNX5-204ENST00000431277 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
SNX5-204ENST00000431277 ARHGEF11O15085 1522 aa27.44■■□□□ 1.98
SNX5-204ENST00000431277 ADAMTS12P58397 1594 aa27.4■■□□□ 1.98
SNX5-204ENST00000431277 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
SNX5-204ENST00000431277 CLASP1Q7Z460 1538 aa27.35■■□□□ 1.97
SNX5-204ENST00000431277 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
SNX5-204ENST00000431277 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
SNX5-204ENST00000431277 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
SNX5-204ENST00000431277 CYB5RLQ6IPT4 315 aa27.27■■□□□ 1.96
SNX5-204ENST00000431277 CEP170Q5SW79 1584 aa27.21■■□□□ 1.95
SNX5-204ENST00000431277 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
SNX5-204ENST00000431277 CUL7Q14999 1698 aa27.17■■□□□ 1.94
SNX5-204ENST00000431277 NUP160Q12769 1436 aa27.15■■□□□ 1.94
SNX5-204ENST00000431277 IGF1RP08069 1367 aa27.1■■□□□ 1.93
SNX5-204ENST00000431277 SHROOM2Q13796 1616 aa27.01■■□□□ 1.92
SNX5-204ENST00000431277 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.91
SNX5-204ENST00000431277 RUSC2Q8N2Y8 1516 aa27■■□□□ 1.91
SNX5-204ENST00000431277 ERCC6L2Q5T890 1561 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms