RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
PTPN4-203ENST00000430976 MYT1Q01538 1121 aa9.74□□□□□ -0.85
PTPN4-203ENST00000430976 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
PTPN4-203ENST00000430976 ERICH6Q7L0X2 663 aa9.42□□□□□ -0.9
PTPN4-203ENST00000430976 PRKCSHP14314 528 aaPredicted RBP9.4□□□□□ -0.91
PTPN4-203ENST00000430976 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
PTPN4-203ENST00000430976 TTBK1Q5TCY1 1321 aaPredicted RBP9.33□□□□□ -0.92
PTPN4-203ENST00000430976 AEBP2Q6ZN18 517 aaPredicted RBP9.21□□□□□ -0.93
PTPN4-203ENST00000430976 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
PTPN4-203ENST00000430976 CHIC1Q5VXU3 224 aa9.1□□□□□ -0.95
PTPN4-203ENST00000430976 PLPPR3Q6T4P5 718 aa9.03□□□□□ -0.96
PTPN4-203ENST00000430976 EIF5BO60841 1220 aaKnown RBP9.01□□□□□ -0.97
PTPN4-203ENST00000430976 APLP2Q06481 763 aa8.95□□□□□ -0.98
PTPN4-203ENST00000430976 RTN4Q9NQC3 1192 aaKnown RBP8.91□□□□□ -0.98
PTPN4-203ENST00000430976 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.99
PTPN4-203ENST00000430976 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
PTPN4-203ENST00000430976 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
PTPN4-203ENST00000430976 NCBP3Q53F19 620 aaKnown RBP8.69□□□□□ -1.02
PTPN4-203ENST00000430976 TULP1O00294 542 aaPredicted RBP8.65□□□□□ -1.02
PTPN4-203ENST00000430976 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
PTPN4-203ENST00000430976 PODXL2Q9NZ53 605 aa8.61□□□□□ -1.03
PTPN4-203ENST00000430976 TIMELESSQ9UNS1 1208 aa8.61□□□□□ -1.03
PTPN4-203ENST00000430976 FAM9AQ8IZU1 332 aaPredicted RBP8.59□□□□□ -1.03
PTPN4-203ENST00000430976 HAP1P54257 671 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-203ENST00000430976 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-203ENST00000430976 ARXQ96QS3 562 aa8.42□□□□□ -1.06
PTPN4-203ENST00000430976 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
PTPN4-203ENST00000430976 AMER1Q5JTC6 1135 aaPredicted RBP8.38□□□□□ -1.07
PTPN4-203ENST00000430976 HOMEZQ8IX15 550 aa8.38□□□□□ -1.07
PTPN4-203ENST00000430976 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
PTPN4-203ENST00000430976 KCNA4P22459 653 aa8.31□□□□□ -1.08
PTPN4-203ENST00000430976 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
PTPN4-203ENST00000430976 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
PTPN4-203ENST00000430976 PDE4CQ08493 712 aa8.27□□□□□ -1.09
PTPN4-203ENST00000430976 POLR3GLQ9BT43 218 aa8.26□□□□□ -1.09
PTPN4-203ENST00000430976 TAOK2Q9UL54 1235 aa8.25□□□□□ -1.09
PTPN4-203ENST00000430976 NEFLP07196 543 aa8.25□□□□□ -1.09
PTPN4-203ENST00000430976 PKNOX2Q96KN3 472 aa8.25□□□□□ -1.09
PTPN4-203ENST00000430976 A0A0U1RQG5 324 aaPredicted RBP8.22□□□□□ -1.09
PTPN4-203ENST00000430976 PPARGC1BQ86YN6 1023 aaKnown RBP8.2□□□□□ -1.1
PTPN4-203ENST00000430976 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
PTPN4-203ENST00000430976 DHX37Q8IY37 1157 aaKnown RBP8.19□□□□□ -1.1
PTPN4-203ENST00000430976 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
PTPN4-203ENST00000430976 SCAF1Q9H7N4 1312 aaKnown RBP8.18□□□□□ -1.1
PTPN4-203ENST00000430976 CCDC136Q96JN2 1154 aa8.18□□□□□ -1.1
PTPN4-203ENST00000430976 ZEB1P37275 1124 aaPredicted RBP8.12□□□□□ -1.11
PTPN4-203ENST00000430976 HRCP23327 699 aa8.12□□□□□ -1.11
PTPN4-203ENST00000430976 UBE2Q2Q8WVN8 375 aa8.1□□□□□ -1.11
PTPN4-203ENST00000430976 BCANQ96GW7 911 aa8.09□□□□□ -1.11
PTPN4-203ENST00000430976 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
PTPN4-203ENST00000430976 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
PTPN4-203ENST00000430976 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-203ENST00000430976 CSRNP3Q8WYN3 585 aa8.07□□□□□ -1.12
PTPN4-203ENST00000430976 PHF23Q9BUL5 403 aaPredicted RBP8.07□□□□□ -1.12
PTPN4-203ENST00000430976 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
PTPN4-203ENST00000430976 DCAF8L2P0C7V8 631 aa8.06□□□□□ -1.12
PTPN4-203ENST00000430976 CDK11BP21127 795 aaKnown RBP8.05□□□□□ -1.12
PTPN4-203ENST00000430976 CDK11AQ9UQ88 783 aaPredicted RBP8.05□□□□□ -1.12
PTPN4-203ENST00000430976 IRX6P78412 446 aaPredicted RBP8.02□□□□□ -1.13
PTPN4-203ENST00000430976 ANP32EQ9BTT0 268 aa8□□□□□ -1.13
PTPN4-203ENST00000430976 LOC105371045A0A1W2PR82 267 aa7.98□□□□□ -1.13
PTPN4-203ENST00000430976 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
PTPN4-203ENST00000430976 PAXIP1Q6ZW49 1069 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-203ENST00000430976 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.13
PTPN4-203ENST00000430976 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
PTPN4-203ENST00000430976 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.95□□□□□ -1.14
PTPN4-203ENST00000430976 GLIPR1L2Q4G1C9 344 aa7.95□□□□□ -1.14
PTPN4-203ENST00000430976 PCGF6Q9BYE7 350 aa7.92□□□□□ -1.14
PTPN4-203ENST00000430976 ARID3AQ99856 593 aa7.91□□□□□ -1.14
PTPN4-203ENST00000430976 CLSPNQ9HAW4 1339 aa7.91□□□□□ -1.14
PTPN4-203ENST00000430976 BRD2P25440 801 aaKnown RBP7.9□□□□□ -1.14
PTPN4-203ENST00000430976 NAP1L5Q96NT1 182 aaPredicted RBP7.9□□□□□ -1.14
PTPN4-203ENST00000430976 UBTFP17480 764 aaKnown RBP7.89□□□□□ -1.15
PTPN4-203ENST00000430976 DEKP35659 375 aaKnown RBP7.88□□□□□ -1.15
PTPN4-203ENST00000430976 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
PTPN4-203ENST00000430976 FGD1P98174 961 aa7.82□□□□□ -1.16
PTPN4-203ENST00000430976 SAMD1Q6SPF0 538 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-203ENST00000430976 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-203ENST00000430976 PLCB2Q00722 1185 aa7.8□□□□□ -1.16
PTPN4-203ENST00000430976 VSIG10Q8N0Z9 540 aa7.78□□□□□ -1.16
PTPN4-203ENST00000430976 TMEM132AQ24JP5 1023 aa7.78□□□□□ -1.16
PTPN4-203ENST00000430976 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.17
PTPN4-203ENST00000430976 FBXO3Q9UK99 471 aa7.77□□□□□ -1.17
PTPN4-203ENST00000430976 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
PTPN4-203ENST00000430976 NEUROD1Q13562 356 aa7.75□□□□□ -1.17
PTPN4-203ENST00000430976 CCDC9Q9Y3X0 531 aaKnown RBP7.74□□□□□ -1.17
PTPN4-203ENST00000430976 RBM10P98175 930 aaKnown RBP7.73□□□□□ -1.17
PTPN4-203ENST00000430976 HSP90B1P14625 803 aaKnown RBP7.7□□□□□ -1.18
PTPN4-203ENST00000430976 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
PTPN4-203ENST00000430976 RTL5Q5HYW3 569 aaPredicted RBP7.68□□□□□ -1.18
PTPN4-203ENST00000430976 SLC4A1APQ9BWU0 796 aaKnown RBP7.68□□□□□ -1.18
PTPN4-203ENST00000430976 YTHDC1Q96MU7 727 aaKnown RBP7.68□□□□□ -1.18
PTPN4-203ENST00000430976 IGSF3O75054 1194 aa7.68□□□□□ -1.18
PTPN4-203ENST00000430976 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
PTPN4-203ENST00000430976 AAMPQ13685 434 aa7.65□□□□□ -1.18
PTPN4-203ENST00000430976 SENP3Q9H4L4 574 aaPredicted RBP7.65□□□□□ -1.18
PTPN4-203ENST00000430976 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
PTPN4-203ENST00000430976 CNKSR2Q8WXI2 1034 aa7.62□□□□□ -1.19
PTPN4-203ENST00000430976 FBLN2P98095 1184 aa7.6□□□□□ -1.19
PTPN4-203ENST00000430976 ZNF592Q92610 1267 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms