RNA–Protein interactions for RNA: ENST00000430670.5

HDAC7-210, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-210ENST00000430670 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
HDAC7-210ENST00000430670 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
HDAC7-210ENST00000430670 ABCC9O60706 1549 aa35.73■■■■□ 3.31
HDAC7-210ENST00000430670 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
HDAC7-210ENST00000430670 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
HDAC7-210ENST00000430670 NACADO15069 1562 aa34.37■■■■□ 3.09
HDAC7-210ENST00000430670 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
HDAC7-210ENST00000430670 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
HDAC7-210ENST00000430670 DCAF1Q9Y4B6 1507 aa33.96■■■■□ 3.03
HDAC7-210ENST00000430670 PABPN1Q86U42 306 aaKnown RBP eCLIP33.43■■■□□ 2.94
HDAC7-210ENST00000430670 UNC13AQ9UPW8 1703 aa33.29■■■□□ 2.92
HDAC7-210ENST00000430670 BICRAQ9NZM4 1560 aa33.18■■■□□ 2.9
HDAC7-210ENST00000430670 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
HDAC7-210ENST00000430670 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
HDAC7-210ENST00000430670 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
HDAC7-210ENST00000430670 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
HDAC7-210ENST00000430670 CC2D2AQ9P2K1 1620 aa32.28■■■□□ 2.76
HDAC7-210ENST00000430670 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
HDAC7-210ENST00000430670 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
HDAC7-210ENST00000430670 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
HDAC7-210ENST00000430670 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
HDAC7-210ENST00000430670 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
HDAC7-210ENST00000430670 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
HDAC7-210ENST00000430670 HMGXB3Q12766 1538 aa31.5■■■□□ 2.63
HDAC7-210ENST00000430670 PEG3Q9GZU2 1588 aa31.48■■■□□ 2.63
HDAC7-210ENST00000430670 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
HDAC7-210ENST00000430670 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
HDAC7-210ENST00000430670 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
HDAC7-210ENST00000430670 WIZO95785 1651 aa31.07■■■□□ 2.56
HDAC7-210ENST00000430670 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
HDAC7-210ENST00000430670 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
HDAC7-210ENST00000430670 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
HDAC7-210ENST00000430670 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
HDAC7-210ENST00000430670 NESP48681 1621 aa30.81■■■□□ 2.52
HDAC7-210ENST00000430670 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
HDAC7-210ENST00000430670 CUX2O14529 1486 aa30.64■■■□□ 2.5
HDAC7-210ENST00000430670 CFTRP13569 1480 aa30.57■■■□□ 2.48
HDAC7-210ENST00000430670 CCDC88BA6NC98 1476 aa30.51■■■□□ 2.48
HDAC7-210ENST00000430670 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
HDAC7-210ENST00000430670 CEP164Q9UPV0 1460 aa30.39■■■□□ 2.46
HDAC7-210ENST00000430670 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
HDAC7-210ENST00000430670 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
HDAC7-210ENST00000430670 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
HDAC7-210ENST00000430670 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
HDAC7-210ENST00000430670 WDR62O43379 1518 aa30.2■■■□□ 2.42
HDAC7-210ENST00000430670 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
HDAC7-210ENST00000430670 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
HDAC7-210ENST00000430670 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
HDAC7-210ENST00000430670 DNAJC5Q9H3Z4 198 aa29.89■■■□□ 2.38
HDAC7-210ENST00000430670 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
HDAC7-210ENST00000430670 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
HDAC7-210ENST00000430670 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
HDAC7-210ENST00000430670 SOGA1O94964 1423 aa29.6■■■□□ 2.33
HDAC7-210ENST00000430670 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
HDAC7-210ENST00000430670 CUX1P39880 1505 aa29.53■■■□□ 2.32
HDAC7-210ENST00000430670 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.32
HDAC7-210ENST00000430670 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
HDAC7-210ENST00000430670 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
HDAC7-210ENST00000430670 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
HDAC7-210ENST00000430670 WRNQ14191 1432 aaPredicted RBP eCLIP29.45■■■□□ 2.315e-6■■■■■ 29.2
HDAC7-210ENST00000430670 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
HDAC7-210ENST00000430670 AQRO60306 1485 aaKnown RBP eCLIP29.41■■■□□ 2.34e-7■■■■□ 26.7
HDAC7-210ENST00000430670 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
HDAC7-210ENST00000430670 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
HDAC7-210ENST00000430670 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
HDAC7-210ENST00000430670 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
HDAC7-210ENST00000430670 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
HDAC7-210ENST00000430670 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
HDAC7-210ENST00000430670 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
HDAC7-210ENST00000430670 FBLN2P98095 1184 aa29.23■■■□□ 2.27
HDAC7-210ENST00000430670 GAPVD1Q14C86 1478 aa29.21■■■□□ 2.27
HDAC7-210ENST00000430670 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
HDAC7-210ENST00000430670 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
HDAC7-210ENST00000430670 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
HDAC7-210ENST00000430670 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
HDAC7-210ENST00000430670 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
HDAC7-210ENST00000430670 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
HDAC7-210ENST00000430670 PBRM1Q86U86 1689 aa28.95■■■□□ 2.22
HDAC7-210ENST00000430670 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
HDAC7-210ENST00000430670 CHD1O14646 1710 aa28.94■■■□□ 2.22
HDAC7-210ENST00000430670 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
HDAC7-210ENST00000430670 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
HDAC7-210ENST00000430670 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
HDAC7-210ENST00000430670 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
HDAC7-210ENST00000430670 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
HDAC7-210ENST00000430670 ADAMTS12P58397 1594 aa28.77■■■□□ 2.2
HDAC7-210ENST00000430670 IGF1RP08069 1367 aa28.75■■■□□ 2.19
HDAC7-210ENST00000430670 CLASP1Q7Z460 1538 aa28.73■■■□□ 2.19
HDAC7-210ENST00000430670 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
HDAC7-210ENST00000430670 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
HDAC7-210ENST00000430670 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
HDAC7-210ENST00000430670 NUP160Q12769 1436 aa28.69■■■□□ 2.18
HDAC7-210ENST00000430670 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
HDAC7-210ENST00000430670 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
HDAC7-210ENST00000430670 CUL7Q14999 1698 aa28.61■■■□□ 2.17
HDAC7-210ENST00000430670 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
HDAC7-210ENST00000430670 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
HDAC7-210ENST00000430670 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
HDAC7-210ENST00000430670 KIAA0586Q9BVV6 1533 aa28.46■■■□□ 2.15
HDAC7-210ENST00000430670 RAPGEF2Q9Y4G8 1499 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms