RNA–Protein interactions for RNA: ENST00000430601.1

TMEM44-207, Transcript of transmembrane protein 44, humanhuman

TSL 3

Gene TMEM44, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-207ENST00000430601 NISCHQ9Y2I1 1504 aa51.62■■■■■ 5.85
TMEM44-207ENST00000430601 CCDC180Q9P1Z9 1646 aa46.11■■■■■ 4.97
TMEM44-207ENST00000430601 ABCC9O60706 1549 aa46.08■■■■■ 4.97
TMEM44-207ENST00000430601 RB1CC1Q8TDY2 1594 aa43.82■■■■■ 4.61
TMEM44-207ENST00000430601 DCAF8L2P0C7V8 631 aa43.6■■■■■ 4.57
TMEM44-207ENST00000430601 NACADO15069 1562 aa43.56■■■■■ 4.56
TMEM44-207ENST00000430601 DNAJC5BQ9UF47 199 aa43.09■■■■■ 4.49
TMEM44-207ENST00000430601 PABPN1Q86U42 306 aaKnown RBP eCLIP43■■■■■ 4.47
TMEM44-207ENST00000430601 MYO15BQ96JP2 1530 aa42.99■■■■■ 4.47
TMEM44-207ENST00000430601 UNC13AQ9UPW8 1703 aa42.9■■■■■ 4.46
TMEM44-207ENST00000430601 ZCCHC6Q5VYS8 1495 aaKnown RBP42.83■■■■■ 4.45
TMEM44-207ENST00000430601 BICRAQ9NZM4 1560 aa42.64■■■■■ 4.42
TMEM44-207ENST00000430601 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
TMEM44-207ENST00000430601 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
TMEM44-207ENST00000430601 SHROOM4Q9ULL8 1493 aa41.88■■■■■ 4.29
TMEM44-207ENST00000430601 CC2D2AQ9P2K1 1620 aa41.58■■■■■ 4.25
TMEM44-207ENST00000430601 EIF4G1Q04637 1599 aaKnown RBP41.54■■■■■ 4.24
TMEM44-207ENST00000430601 CECR2Q9BXF3 1484 aa41.42■■■■■ 4.22
TMEM44-207ENST00000430601 NCAPD3P42695 1498 aa40.26■■■■■ 4.03
TMEM44-207ENST00000430601 SMARCA4P51532 1647 aa40.22■■■■■ 4.03
TMEM44-207ENST00000430601 ATAD2BQ9ULI0 1458 aa40.21■■■■■ 4.03
TMEM44-207ENST00000430601 SMARCA2P51531 1590 aa40.03■■■■■ 4
TMEM44-207ENST00000430601 BAZ1AQ9NRL2 1556 aaPredicted RBP40.01■■■■■ 4
TMEM44-207ENST00000430601 HMGXB3Q12766 1538 aa39.95■■■■□ 3.99
TMEM44-207ENST00000430601 MROH2BQ7Z745 1585 aa39.85■■■■□ 3.97
TMEM44-207ENST00000430601 BAZ1BQ9UIG0 1483 aaKnown RBP39.82■■■■□ 3.97
TMEM44-207ENST00000430601 PEG3Q9GZU2 1588 aa39.76■■■■□ 3.96
TMEM44-207ENST00000430601 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
TMEM44-207ENST00000430601 NESP48681 1621 aa39.69■■■■□ 3.94
TMEM44-207ENST00000430601 CUX2O14529 1486 aa39.47■■■■□ 3.91
TMEM44-207ENST00000430601 WIZO95785 1651 aa39.38■■■■□ 3.9
TMEM44-207ENST00000430601 LAMC3Q9Y6N6 1575 aa39.28■■■■□ 3.88
TMEM44-207ENST00000430601 DNAJC5Q9H3Z4 198 aa39.25■■■■□ 3.87
TMEM44-207ENST00000430601 THOC2Q8NI27 1593 aaKnown RBP39.13■■■■□ 3.85
TMEM44-207ENST00000430601 KIF21AQ7Z4S6 1674 aa39.1■■■■□ 3.85
TMEM44-207ENST00000430601 RSF1Q96T23 1441 aaPredicted RBP39.1■■■■□ 3.85
TMEM44-207ENST00000430601 CADPSQ9ULU8 1353 aa39.07■■■■□ 3.84
TMEM44-207ENST00000430601 PDS5BQ9NTI5 1447 aa39.06■■■■□ 3.84
TMEM44-207ENST00000430601 TOP2AP11388 1531 aaKnown RBP38.83■■■■□ 3.81
TMEM44-207ENST00000430601 MRC2Q9UBG0 1479 aa38.74■■■■□ 3.79
TMEM44-207ENST00000430601 CFTRP13569 1480 aa38.66■■■■□ 3.78
TMEM44-207ENST00000430601 FANCD2Q9BXW9 1451 aa38.65■■■■□ 3.78
TMEM44-207ENST00000430601 CEP164Q9UPV0 1460 aa38.63■■■■□ 3.77
TMEM44-207ENST00000430601 WDR62O43379 1518 aa38.63■■■■□ 3.77
TMEM44-207ENST00000430601 CCDC88BA6NC98 1476 aa38.45■■■■□ 3.75
TMEM44-207ENST00000430601 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
TMEM44-207ENST00000430601 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
TMEM44-207ENST00000430601 TOPBP1Q92547 1522 aa37.94■■■■□ 3.66
TMEM44-207ENST00000430601 ZNF608Q9ULD9 1512 aaPredicted RBP37.87■■■■□ 3.65
TMEM44-207ENST00000430601 IFT140Q96RY7 1462 aa37.84■■■■□ 3.65
TMEM44-207ENST00000430601 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
TMEM44-207ENST00000430601 OSCARQ8IYS5 282 aa37.76■■■■□ 3.64
TMEM44-207ENST00000430601 ABCC8Q09428 1581 aa37.75■■■■□ 3.63
TMEM44-207ENST00000430601 TRIM41Q8WV44 630 aa37.73■■■■□ 3.63
TMEM44-207ENST00000430601 SUPT5HO00267 1087 aaKnown RBP37.63■■■■□ 3.61
TMEM44-207ENST00000430601 EIF4G3O43432 1585 aaKnown RBP37.6■■■■□ 3.61
TMEM44-207ENST00000430601 TARBP1Q13395 1621 aaKnown RBP37.58■■■■□ 3.61
TMEM44-207ENST00000430601 POLA1P09884 1462 aaPredicted RBP37.58■■■■□ 3.61
TMEM44-207ENST00000430601 AQRO60306 1485 aaKnown RBP eCLIP37.54■■■■□ 3.6
TMEM44-207ENST00000430601 RAD54L2Q9Y4B4 1467 aa37.51■■■■□ 3.59
TMEM44-207ENST00000430601 CUX1P39880 1505 aa37.41■■■■□ 3.58
TMEM44-207ENST00000430601 SOGA1O94964 1423 aa37.41■■■■□ 3.58
TMEM44-207ENST00000430601 FGD5Q6ZNL6 1462 aa37.39■■■■□ 3.58
TMEM44-207ENST00000430601 TDRD9Q8NDG6 1382 aaKnown RBP37.37■■■■□ 3.57
TMEM44-207ENST00000430601 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
TMEM44-207ENST00000430601 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
TMEM44-207ENST00000430601 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
TMEM44-207ENST00000430601 CHD1O14646 1710 aa37.27■■■■□ 3.56
TMEM44-207ENST00000430601 FBLN2P98095 1184 aa37.25■■■■□ 3.55
TMEM44-207ENST00000430601 ARHGEF11O15085 1522 aa37.18■■■■□ 3.54
TMEM44-207ENST00000430601 SNAPC4Q5SXM2 1469 aa37.14■■■■□ 3.54
TMEM44-207ENST00000430601 WDR97A6NE52 1622 aa37.07■■■■□ 3.53
TMEM44-207ENST00000430601 GRIN2BQ13224 1484 aa37.01■■■■□ 3.52
TMEM44-207ENST00000430601 MAGI1Q96QZ7 1491 aaPredicted RBP36.96■■■■□ 3.51
TMEM44-207ENST00000430601 CHMP7Q8WUX9 453 aaPredicted RBP36.96■■■■□ 3.51
TMEM44-207ENST00000430601 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
TMEM44-207ENST00000430601 CYB5RLQ6IPT4 315 aa36.94■■■■□ 3.5
TMEM44-207ENST00000430601 ABCA10Q8WWZ4 1543 aa36.93■■■■□ 3.5
TMEM44-207ENST00000430601 PBRM1Q86U86 1689 aa36.9■■■■□ 3.5
TMEM44-207ENST00000430601 SYNJ2O15056 1496 aa36.87■■■■□ 3.49
TMEM44-207ENST00000430601 ARAP1Q96P48 1450 aa36.87■■■■□ 3.49
TMEM44-207ENST00000430601 ABCA5Q8WWZ7 1642 aa36.86■■■■□ 3.49
TMEM44-207ENST00000430601 SYNJ1O43426 1573 aa36.86■■■■□ 3.49
TMEM44-207ENST00000430601 CLASP1Q7Z460 1538 aa36.85■■■■□ 3.49
TMEM44-207ENST00000430601 WRNQ14191 1432 aaPredicted RBP eCLIP36.85■■■■□ 3.49
TMEM44-207ENST00000430601 TOP2BQ02880 1626 aa36.81■■■■□ 3.48
TMEM44-207ENST00000430601 BIVM-ERCC5R4GMW8 1640 aa36.81■■■■□ 3.48
TMEM44-207ENST00000430601 ADAMTS12P58397 1594 aa36.57■■■■□ 3.45
TMEM44-207ENST00000430601 GRIN2AQ12879 1464 aa36.56■■■■□ 3.44
TMEM44-207ENST00000430601 CEP170Q5SW79 1584 aa36.46■■■■□ 3.43
TMEM44-207ENST00000430601 FHAD1B1AJZ9 1412 aa36.46■■■■□ 3.43
TMEM44-207ENST00000430601 TRHP20396 242 aaPredicted RBP36.44■■■■□ 3.42
TMEM44-207ENST00000430601 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
TMEM44-207ENST00000430601 NUP160Q12769 1436 aa36.42■■■■□ 3.42
TMEM44-207ENST00000430601 ERCC6L2Q5T890 1561 aa36.4■■■■□ 3.42
TMEM44-207ENST00000430601 SHROOM2Q13796 1616 aa36.21■■■■□ 3.39
TMEM44-207ENST00000430601 IGF1RP08069 1367 aa36.13■■■■□ 3.37
TMEM44-207ENST00000430601 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
TMEM44-207ENST00000430601 PRG4Q92954 1404 aaPredicted RBP36.09■■■■□ 3.37
TMEM44-207ENST00000430601 JPH4Q96JJ6 628 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms