RNA–Protein interactions for RNA: ENST00000429920.1

ATG9A-208, Transcript of autophagy related 9A, humanhuman

TSL 5

Gene ATG9A, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-208ENST00000429920 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
ATG9A-208ENST00000429920 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
ATG9A-208ENST00000429920 ABCC9O60706 1549 aa24.81■■□□□ 1.56
ATG9A-208ENST00000429920 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
ATG9A-208ENST00000429920 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
ATG9A-208ENST00000429920 NACADO15069 1562 aa23.68■■□□□ 1.38
ATG9A-208ENST00000429920 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
ATG9A-208ENST00000429920 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
ATG9A-208ENST00000429920 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.32
ATG9A-208ENST00000429920 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATG9A-208ENST00000429920 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.28
ATG9A-208ENST00000429920 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
ATG9A-208ENST00000429920 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
ATG9A-208ENST00000429920 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
ATG9A-208ENST00000429920 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
ATG9A-208ENST00000429920 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
ATG9A-208ENST00000429920 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
ATG9A-208ENST00000429920 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
ATG9A-208ENST00000429920 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
ATG9A-208ENST00000429920 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
ATG9A-208ENST00000429920 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
ATG9A-208ENST00000429920 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
ATG9A-208ENST00000429920 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
ATG9A-208ENST00000429920 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
ATG9A-208ENST00000429920 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
ATG9A-208ENST00000429920 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
ATG9A-208ENST00000429920 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
ATG9A-208ENST00000429920 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
ATG9A-208ENST00000429920 WIZO95785 1651 aa21.52■■□□□ 1.04
ATG9A-208ENST00000429920 NESP48681 1621 aa21.41■■□□□ 1.02
ATG9A-208ENST00000429920 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
ATG9A-208ENST00000429920 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
ATG9A-208ENST00000429920 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
ATG9A-208ENST00000429920 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
ATG9A-208ENST00000429920 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
ATG9A-208ENST00000429920 CUX2O14529 1486 aa21.15■□□□□ 0.98
ATG9A-208ENST00000429920 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
ATG9A-208ENST00000429920 CFTRP13569 1480 aa21.09■□□□□ 0.97
ATG9A-208ENST00000429920 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
ATG9A-208ENST00000429920 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
ATG9A-208ENST00000429920 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
ATG9A-208ENST00000429920 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
ATG9A-208ENST00000429920 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
ATG9A-208ENST00000429920 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
ATG9A-208ENST00000429920 WDR62O43379 1518 aa20.85■□□□□ 0.93
ATG9A-208ENST00000429920 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
ATG9A-208ENST00000429920 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
ATG9A-208ENST00000429920 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
ATG9A-208ENST00000429920 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
ATG9A-208ENST00000429920 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
ATG9A-208ENST00000429920 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
ATG9A-208ENST00000429920 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
ATG9A-208ENST00000429920 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
ATG9A-208ENST00000429920 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
ATG9A-208ENST00000429920 SOGA1O94964 1423 aa20.45■□□□□ 0.86
ATG9A-208ENST00000429920 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
ATG9A-208ENST00000429920 CUX1P39880 1505 aa20.43■□□□□ 0.86
ATG9A-208ENST00000429920 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
ATG9A-208ENST00000429920 AQRO60306 1485 aaKnown RBP eCLIP20.4■□□□□ 0.86
ATG9A-208ENST00000429920 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
ATG9A-208ENST00000429920 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
ATG9A-208ENST00000429920 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
ATG9A-208ENST00000429920 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
ATG9A-208ENST00000429920 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
ATG9A-208ENST00000429920 FBLN2P98095 1184 aa20.29■□□□□ 0.84
ATG9A-208ENST00000429920 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
ATG9A-208ENST00000429920 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
ATG9A-208ENST00000429920 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
ATG9A-208ENST00000429920 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
ATG9A-208ENST00000429920 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
ATG9A-208ENST00000429920 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
ATG9A-208ENST00000429920 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
ATG9A-208ENST00000429920 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
ATG9A-208ENST00000429920 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
ATG9A-208ENST00000429920 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
ATG9A-208ENST00000429920 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
ATG9A-208ENST00000429920 CHD1O14646 1710 aa20.06■□□□□ 0.8
ATG9A-208ENST00000429920 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
ATG9A-208ENST00000429920 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
ATG9A-208ENST00000429920 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
ATG9A-208ENST00000429920 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
ATG9A-208ENST00000429920 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
ATG9A-208ENST00000429920 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
ATG9A-208ENST00000429920 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
ATG9A-208ENST00000429920 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
ATG9A-208ENST00000429920 IGF1RP08069 1367 aa19.87■□□□□ 0.77
ATG9A-208ENST00000429920 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
ATG9A-208ENST00000429920 NUP160Q12769 1436 aa19.8■□□□□ 0.76
ATG9A-208ENST00000429920 CEP170Q5SW79 1584 aa19.77■□□□□ 0.76
ATG9A-208ENST00000429920 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
ATG9A-208ENST00000429920 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
ATG9A-208ENST00000429920 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
ATG9A-208ENST00000429920 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
ATG9A-208ENST00000429920 CUL7Q14999 1698 aa19.68■□□□□ 0.74
ATG9A-208ENST00000429920 PRG4Q92954 1404 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms