RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
RCC1-208ENST00000429051 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
RCC1-208ENST00000429051 ABCC9O60706 1549 aa24.79■■□□□ 1.56
RCC1-208ENST00000429051 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
RCC1-208ENST00000429051 NACADO15069 1562 aa23.76■■□□□ 1.39
RCC1-208ENST00000429051 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
RCC1-208ENST00000429051 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
RCC1-208ENST00000429051 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
RCC1-208ENST00000429051 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
RCC1-208ENST00000429051 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
RCC1-208ENST00000429051 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
RCC1-208ENST00000429051 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
RCC1-208ENST00000429051 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
RCC1-208ENST00000429051 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
RCC1-208ENST00000429051 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.25
RCC1-208ENST00000429051 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
RCC1-208ENST00000429051 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
RCC1-208ENST00000429051 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
RCC1-208ENST00000429051 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
RCC1-208ENST00000429051 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
RCC1-208ENST00000429051 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
RCC1-208ENST00000429051 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
RCC1-208ENST00000429051 ATAD2BQ9ULI0 1458 aa21.86■■□□□ 1.09
RCC1-208ENST00000429051 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
RCC1-208ENST00000429051 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
RCC1-208ENST00000429051 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
RCC1-208ENST00000429051 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
RCC1-208ENST00000429051 WIZO95785 1651 aa21.51■■□□□ 1.03
RCC1-208ENST00000429051 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
RCC1-208ENST00000429051 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
RCC1-208ENST00000429051 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
RCC1-208ENST00000429051 NESP48681 1621 aa21.38■■□□□ 1.01
RCC1-208ENST00000429051 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
RCC1-208ENST00000429051 CUX2O14529 1486 aa21.28■■□□□ 1
RCC1-208ENST00000429051 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
RCC1-208ENST00000429051 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
RCC1-208ENST00000429051 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
RCC1-208ENST00000429051 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
RCC1-208ENST00000429051 CFTRP13569 1480 aa21.07■□□□□ 0.96
RCC1-208ENST00000429051 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
RCC1-208ENST00000429051 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
RCC1-208ENST00000429051 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
RCC1-208ENST00000429051 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
RCC1-208ENST00000429051 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
RCC1-208ENST00000429051 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
RCC1-208ENST00000429051 WDR62O43379 1518 aa20.95■□□□□ 0.94
RCC1-208ENST00000429051 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
RCC1-208ENST00000429051 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
RCC1-208ENST00000429051 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
RCC1-208ENST00000429051 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
RCC1-208ENST00000429051 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
RCC1-208ENST00000429051 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
RCC1-208ENST00000429051 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
RCC1-208ENST00000429051 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
RCC1-208ENST00000429051 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
RCC1-208ENST00000429051 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
RCC1-208ENST00000429051 CUX1P39880 1505 aa20.41■□□□□ 0.86
RCC1-208ENST00000429051 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
RCC1-208ENST00000429051 SOGA1O94964 1423 aa20.36■□□□□ 0.85
RCC1-208ENST00000429051 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
RCC1-208ENST00000429051 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
RCC1-208ENST00000429051 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
RCC1-208ENST00000429051 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
RCC1-208ENST00000429051 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
RCC1-208ENST00000429051 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
RCC1-208ENST00000429051 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
RCC1-208ENST00000429051 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
RCC1-208ENST00000429051 CHD1O14646 1710 aa20.2■□□□□ 0.82
RCC1-208ENST00000429051 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
RCC1-208ENST00000429051 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
RCC1-208ENST00000429051 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
RCC1-208ENST00000429051 SNAPC4Q5SXM2 1469 aa20.15■□□□□ 0.82
RCC1-208ENST00000429051 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
RCC1-208ENST00000429051 PBRM1Q86U86 1689 aa20.15■□□□□ 0.82
RCC1-208ENST00000429051 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
RCC1-208ENST00000429051 FBLN2P98095 1184 aa20.13■□□□□ 0.81
RCC1-208ENST00000429051 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
RCC1-208ENST00000429051 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
RCC1-208ENST00000429051 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
RCC1-208ENST00000429051 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
RCC1-208ENST00000429051 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
RCC1-208ENST00000429051 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
RCC1-208ENST00000429051 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
RCC1-208ENST00000429051 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
RCC1-208ENST00000429051 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
RCC1-208ENST00000429051 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
RCC1-208ENST00000429051 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
RCC1-208ENST00000429051 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
RCC1-208ENST00000429051 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
RCC1-208ENST00000429051 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
RCC1-208ENST00000429051 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
RCC1-208ENST00000429051 NUP160Q12769 1436 aa19.81■□□□□ 0.76
RCC1-208ENST00000429051 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
RCC1-208ENST00000429051 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
RCC1-208ENST00000429051 CUL7Q14999 1698 aa19.78■□□□□ 0.76
RCC1-208ENST00000429051 IGF1RP08069 1367 aa19.72■□□□□ 0.75
RCC1-208ENST00000429051 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
RCC1-208ENST00000429051 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
RCC1-208ENST00000429051 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
RCC1-208ENST00000429051 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms