RNA–Protein interactions for RNA: ENST00000428617.1

MAP3K13-204, Transcript of mitogen-activated protein kinase kinase kinase 13, humanhuman

TSL 4

Gene MAP3K13, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K13-204ENST00000428617 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
MAP3K13-204ENST00000428617 ABCC9O60706 1549 aa15.81■□□□□ 0.12
MAP3K13-204ENST00000428617 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
MAP3K13-204ENST00000428617 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
MAP3K13-204ENST00000428617 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
MAP3K13-204ENST00000428617 NACADO15069 1562 aa14.84□□□□□ -0.03
MAP3K13-204ENST00000428617 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
MAP3K13-204ENST00000428617 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
MAP3K13-204ENST00000428617 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
MAP3K13-204ENST00000428617 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
MAP3K13-204ENST00000428617 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
MAP3K13-204ENST00000428617 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
MAP3K13-204ENST00000428617 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
MAP3K13-204ENST00000428617 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
MAP3K13-204ENST00000428617 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
MAP3K13-204ENST00000428617 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
MAP3K13-204ENST00000428617 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
MAP3K13-204ENST00000428617 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
MAP3K13-204ENST00000428617 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
MAP3K13-204ENST00000428617 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
MAP3K13-204ENST00000428617 NCAPD3P42695 1498 aa13.71□□□□□ -0.21
MAP3K13-204ENST00000428617 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
MAP3K13-204ENST00000428617 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
MAP3K13-204ENST00000428617 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
MAP3K13-204ENST00000428617 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
MAP3K13-204ENST00000428617 NESP48681 1621 aa13.62□□□□□ -0.23
MAP3K13-204ENST00000428617 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
MAP3K13-204ENST00000428617 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
MAP3K13-204ENST00000428617 WIZO95785 1651 aa13.55□□□□□ -0.24
MAP3K13-204ENST00000428617 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
MAP3K13-204ENST00000428617 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
MAP3K13-204ENST00000428617 CUX2O14529 1486 aa13.4□□□□□ -0.26
MAP3K13-204ENST00000428617 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
MAP3K13-204ENST00000428617 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
MAP3K13-204ENST00000428617 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
MAP3K13-204ENST00000428617 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
MAP3K13-204ENST00000428617 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
MAP3K13-204ENST00000428617 SUPT5HO00267 1087 aaKnown RBP13.33□□□□□ -0.28
MAP3K13-204ENST00000428617 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
MAP3K13-204ENST00000428617 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
MAP3K13-204ENST00000428617 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
MAP3K13-204ENST00000428617 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
MAP3K13-204ENST00000428617 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
MAP3K13-204ENST00000428617 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
MAP3K13-204ENST00000428617 CFTRP13569 1480 aa13.2□□□□□ -0.3
MAP3K13-204ENST00000428617 WDR62O43379 1518 aa13.15□□□□□ -0.3
MAP3K13-204ENST00000428617 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
MAP3K13-204ENST00000428617 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
MAP3K13-204ENST00000428617 TRIM41Q8WV44 630 aa13□□□□□ -0.33
MAP3K13-204ENST00000428617 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
MAP3K13-204ENST00000428617 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
MAP3K13-204ENST00000428617 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
MAP3K13-204ENST00000428617 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
MAP3K13-204ENST00000428617 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
MAP3K13-204ENST00000428617 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
MAP3K13-204ENST00000428617 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
MAP3K13-204ENST00000428617 FBLN2P98095 1184 aa12.9□□□□□ -0.34
MAP3K13-204ENST00000428617 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
MAP3K13-204ENST00000428617 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
MAP3K13-204ENST00000428617 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
MAP3K13-204ENST00000428617 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
MAP3K13-204ENST00000428617 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
MAP3K13-204ENST00000428617 SOGA1O94964 1423 aa12.85□□□□□ -0.35
MAP3K13-204ENST00000428617 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
MAP3K13-204ENST00000428617 FGD5Q6ZNL6 1462 aa12.83□□□□□ -0.36
MAP3K13-204ENST00000428617 CUX1P39880 1505 aa12.83□□□□□ -0.36
MAP3K13-204ENST00000428617 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
MAP3K13-204ENST00000428617 CHD1O14646 1710 aa12.76□□□□□ -0.37
MAP3K13-204ENST00000428617 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
MAP3K13-204ENST00000428617 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
MAP3K13-204ENST00000428617 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
MAP3K13-204ENST00000428617 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
MAP3K13-204ENST00000428617 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
MAP3K13-204ENST00000428617 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
MAP3K13-204ENST00000428617 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
MAP3K13-204ENST00000428617 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
MAP3K13-204ENST00000428617 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
MAP3K13-204ENST00000428617 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
MAP3K13-204ENST00000428617 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
MAP3K13-204ENST00000428617 WDR97A6NE52 1622 aa12.65□□□□□ -0.38
MAP3K13-204ENST00000428617 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
MAP3K13-204ENST00000428617 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
MAP3K13-204ENST00000428617 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
MAP3K13-204ENST00000428617 TOP2BQ02880 1626 aa12.61□□□□□ -0.39
MAP3K13-204ENST00000428617 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
MAP3K13-204ENST00000428617 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
MAP3K13-204ENST00000428617 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
MAP3K13-204ENST00000428617 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
MAP3K13-204ENST00000428617 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
MAP3K13-204ENST00000428617 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
MAP3K13-204ENST00000428617 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
MAP3K13-204ENST00000428617 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
MAP3K13-204ENST00000428617 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
MAP3K13-204ENST00000428617 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
MAP3K13-204ENST00000428617 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
MAP3K13-204ENST00000428617 EEA1Q15075 1411 aa12.47□□□□□ -0.41
MAP3K13-204ENST00000428617 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
MAP3K13-204ENST00000428617 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
MAP3K13-204ENST00000428617 NUP160Q12769 1436 aa12.42□□□□□ -0.42
MAP3K13-204ENST00000428617 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms