RNA–Protein interactions for RNA: ENST00000428529.1

LINC01728-201, Transcript of long intergenic non-protein coding RNA 1728, humanhuman

TSL 2 BASIC

Gene LINC01728, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01728-201ENST00000428529 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
LINC01728-201ENST00000428529 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
LINC01728-201ENST00000428529 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
LINC01728-201ENST00000428529 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
LINC01728-201ENST00000428529 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
LINC01728-201ENST00000428529 NISCHQ9Y2I1 1504 aa17.86■□□□□ 0.45
LINC01728-201ENST00000428529 FOXD1Q16676 465 aa17.73■□□□□ 0.43
LINC01728-201ENST00000428529 ADRA2BP18089 450 aa17.17■□□□□ 0.34
LINC01728-201ENST00000428529 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
LINC01728-201ENST00000428529 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
LINC01728-201ENST00000428529 ABCC9O60706 1549 aa16.71■□□□□ 0.27
LINC01728-201ENST00000428529 MSH5O43196 834 aa16.29■□□□□ 0.2
LINC01728-201ENST00000428529 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
LINC01728-201ENST00000428529 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
LINC01728-201ENST00000428529 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
LINC01728-201ENST00000428529 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
LINC01728-201ENST00000428529 KCNA4P22459 653 aa15.68■□□□□ 0.1
LINC01728-201ENST00000428529 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
LINC01728-201ENST00000428529 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
LINC01728-201ENST00000428529 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
LINC01728-201ENST00000428529 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC01728-201ENST00000428529 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
LINC01728-201ENST00000428529 NACADO15069 1562 aa15.39■□□□□ 0.05
LINC01728-201ENST00000428529 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
LINC01728-201ENST00000428529 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
LINC01728-201ENST00000428529 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
LINC01728-201ENST00000428529 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
LINC01728-201ENST00000428529 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
LINC01728-201ENST00000428529 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
LINC01728-201ENST00000428529 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
LINC01728-201ENST00000428529 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
LINC01728-201ENST00000428529 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
LINC01728-201ENST00000428529 MYO15BQ96JP2 1530 aa15□□□□□ -0.01
LINC01728-201ENST00000428529 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
LINC01728-201ENST00000428529 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
LINC01728-201ENST00000428529 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
LINC01728-201ENST00000428529 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
LINC01728-201ENST00000428529 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
LINC01728-201ENST00000428529 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
LINC01728-201ENST00000428529 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
LINC01728-201ENST00000428529 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
LINC01728-201ENST00000428529 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
LINC01728-201ENST00000428529 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
LINC01728-201ENST00000428529 CUX2O14529 1486 aa14.5□□□□□ -0.09
LINC01728-201ENST00000428529 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
LINC01728-201ENST00000428529 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
LINC01728-201ENST00000428529 ZBTB22O15209 634 aa14.4□□□□□ -0.1
LINC01728-201ENST00000428529 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
LINC01728-201ENST00000428529 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
LINC01728-201ENST00000428529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC01728-201ENST00000428529 NESP48681 1621 aa14.26□□□□□ -0.13
LINC01728-201ENST00000428529 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
LINC01728-201ENST00000428529 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
LINC01728-201ENST00000428529 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
LINC01728-201ENST00000428529 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
LINC01728-201ENST00000428529 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
LINC01728-201ENST00000428529 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
LINC01728-201ENST00000428529 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
LINC01728-201ENST00000428529 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
LINC01728-201ENST00000428529 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
LINC01728-201ENST00000428529 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
LINC01728-201ENST00000428529 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
LINC01728-201ENST00000428529 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
LINC01728-201ENST00000428529 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
LINC01728-201ENST00000428529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
LINC01728-201ENST00000428529 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
LINC01728-201ENST00000428529 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
LINC01728-201ENST00000428529 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
LINC01728-201ENST00000428529 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
LINC01728-201ENST00000428529 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
LINC01728-201ENST00000428529 WDR62O43379 1518 aa13.86□□□□□ -0.19
LINC01728-201ENST00000428529 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
LINC01728-201ENST00000428529 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
LINC01728-201ENST00000428529 MROH2BQ7Z745 1585 aa13.82□□□□□ -0.2
LINC01728-201ENST00000428529 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
LINC01728-201ENST00000428529 APLP2Q06481 763 aa13.78□□□□□ -0.2
LINC01728-201ENST00000428529 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
LINC01728-201ENST00000428529 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
LINC01728-201ENST00000428529 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
LINC01728-201ENST00000428529 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
LINC01728-201ENST00000428529 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
LINC01728-201ENST00000428529 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
LINC01728-201ENST00000428529 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
LINC01728-201ENST00000428529 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
LINC01728-201ENST00000428529 CAPN15O75808 1086 aa13.66□□□□□ -0.22
LINC01728-201ENST00000428529 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
LINC01728-201ENST00000428529 WIZO95785 1651 aa13.64□□□□□ -0.23
LINC01728-201ENST00000428529 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
LINC01728-201ENST00000428529 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
LINC01728-201ENST00000428529 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
LINC01728-201ENST00000428529 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
LINC01728-201ENST00000428529 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
LINC01728-201ENST00000428529 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
LINC01728-201ENST00000428529 CFTRP13569 1480 aa13.54□□□□□ -0.24
LINC01728-201ENST00000428529 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
LINC01728-201ENST00000428529 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
LINC01728-201ENST00000428529 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
LINC01728-201ENST00000428529 CHD1O14646 1710 aa13.43□□□□□ -0.26
LINC01728-201ENST00000428529 ABCB7O75027 752 aa13.42□□□□□ -0.26
LINC01728-201ENST00000428529 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 391.9 ms