RNA–Protein interactions for RNA: ENST00000428453.5

HERC2P3-205, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 2

Gene HERC2P3, Length 4,383 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-205ENST00000428453 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
HERC2P3-205ENST00000428453 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
HERC2P3-205ENST00000428453 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
HERC2P3-205ENST00000428453 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
HERC2P3-205ENST00000428453 ABCC9O60706 1549 aa19.3■□□□□ 0.68
HERC2P3-205ENST00000428453 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.64
HERC2P3-205ENST00000428453 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
HERC2P3-205ENST00000428453 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
HERC2P3-205ENST00000428453 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.58
HERC2P3-205ENST00000428453 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
HERC2P3-205ENST00000428453 NACADO15069 1562 aa18.61■□□□□ 0.57
HERC2P3-205ENST00000428453 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
HERC2P3-205ENST00000428453 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
HERC2P3-205ENST00000428453 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
HERC2P3-205ENST00000428453 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
HERC2P3-205ENST00000428453 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.44
HERC2P3-205ENST00000428453 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
HERC2P3-205ENST00000428453 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
HERC2P3-205ENST00000428453 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
HERC2P3-205ENST00000428453 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
HERC2P3-205ENST00000428453 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
HERC2P3-205ENST00000428453 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
HERC2P3-205ENST00000428453 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
HERC2P3-205ENST00000428453 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
HERC2P3-205ENST00000428453 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
HERC2P3-205ENST00000428453 WIZO95785 1651 aa17.53■□□□□ 0.4
HERC2P3-205ENST00000428453 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
HERC2P3-205ENST00000428453 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
HERC2P3-205ENST00000428453 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
HERC2P3-205ENST00000428453 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
HERC2P3-205ENST00000428453 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
HERC2P3-205ENST00000428453 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
HERC2P3-205ENST00000428453 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
HERC2P3-205ENST00000428453 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
HERC2P3-205ENST00000428453 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
HERC2P3-205ENST00000428453 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
HERC2P3-205ENST00000428453 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
HERC2P3-205ENST00000428453 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
HERC2P3-205ENST00000428453 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
HERC2P3-205ENST00000428453 APLP2Q06481 763 aa17■□□□□ 0.31
HERC2P3-205ENST00000428453 NESP48681 1621 aa16.99■□□□□ 0.31
HERC2P3-205ENST00000428453 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
HERC2P3-205ENST00000428453 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
HERC2P3-205ENST00000428453 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
HERC2P3-205ENST00000428453 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
HERC2P3-205ENST00000428453 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
HERC2P3-205ENST00000428453 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
HERC2P3-205ENST00000428453 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.29
HERC2P3-205ENST00000428453 FBLN2P98095 1184 aa16.79■□□□□ 0.28
HERC2P3-205ENST00000428453 ERCC6Q03468 1493 aa16.76■□□□□ 0.27
HERC2P3-205ENST00000428453 CFTRP13569 1480 aa16.76■□□□□ 0.27
HERC2P3-205ENST00000428453 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
HERC2P3-205ENST00000428453 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
HERC2P3-205ENST00000428453 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
HERC2P3-205ENST00000428453 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
HERC2P3-205ENST00000428453 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
HERC2P3-205ENST00000428453 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
HERC2P3-205ENST00000428453 FANCD2Q9BXW9 1451 aa16.6■□□□□ 0.25
HERC2P3-205ENST00000428453 SOGA1O94964 1423 aa16.58■□□□□ 0.24
HERC2P3-205ENST00000428453 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
HERC2P3-205ENST00000428453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
HERC2P3-205ENST00000428453 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
HERC2P3-205ENST00000428453 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
HERC2P3-205ENST00000428453 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
HERC2P3-205ENST00000428453 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
HERC2P3-205ENST00000428453 EEA1Q15075 1411 aa16.55■□□□□ 0.24
HERC2P3-205ENST00000428453 SYNJ1O43426 1573 aa16.52■□□□□ 0.23
HERC2P3-205ENST00000428453 CUX2O14529 1486 aa16.52■□□□□ 0.23
HERC2P3-205ENST00000428453 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
HERC2P3-205ENST00000428453 CUX1P39880 1505 aa16.51■□□□□ 0.23
HERC2P3-205ENST00000428453 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
HERC2P3-205ENST00000428453 WDR62O43379 1518 aa16.47■□□□□ 0.23
HERC2P3-205ENST00000428453 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
HERC2P3-205ENST00000428453 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
HERC2P3-205ENST00000428453 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
HERC2P3-205ENST00000428453 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
HERC2P3-205ENST00000428453 TARBP1Q13395 1621 aaKnown RBP16.39■□□□□ 0.21
HERC2P3-205ENST00000428453 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
HERC2P3-205ENST00000428453 TOPBP1Q92547 1522 aa16.38■□□□□ 0.21
HERC2P3-205ENST00000428453 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
HERC2P3-205ENST00000428453 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
HERC2P3-205ENST00000428453 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
HERC2P3-205ENST00000428453 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
HERC2P3-205ENST00000428453 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
HERC2P3-205ENST00000428453 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.21
HERC2P3-205ENST00000428453 ITGAEP38570 1179 aa16.33■□□□□ 0.2
HERC2P3-205ENST00000428453 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
HERC2P3-205ENST00000428453 CLIP1P30622 1438 aa16.31■□□□□ 0.2
HERC2P3-205ENST00000428453 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
HERC2P3-205ENST00000428453 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
HERC2P3-205ENST00000428453 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
HERC2P3-205ENST00000428453 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
HERC2P3-205ENST00000428453 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.19
HERC2P3-205ENST00000428453 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
HERC2P3-205ENST00000428453 IGF1RP08069 1367 aa16.2■□□□□ 0.18
HERC2P3-205ENST00000428453 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
HERC2P3-205ENST00000428453 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.181e-7■■■□□ 17.9
HERC2P3-205ENST00000428453 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
HERC2P3-205ENST00000428453 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
HERC2P3-205ENST00000428453 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms