RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
TSPO-204ENST00000428336 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
TSPO-204ENST00000428336 ABCC9O60706 1549 aa33.76■■■■□ 3
TSPO-204ENST00000428336 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
TSPO-204ENST00000428336 NACADO15069 1562 aa32.11■■■□□ 2.73
TSPO-204ENST00000428336 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
TSPO-204ENST00000428336 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
TSPO-204ENST00000428336 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
TSPO-204ENST00000428336 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
TSPO-204ENST00000428336 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
TSPO-204ENST00000428336 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
TSPO-204ENST00000428336 UNC13AQ9UPW8 1703 aa31.4■■■□□ 2.62
TSPO-204ENST00000428336 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
TSPO-204ENST00000428336 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
TSPO-204ENST00000428336 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
TSPO-204ENST00000428336 EIF4G1Q04637 1599 aaKnown RBP30.5■■■□□ 2.47
TSPO-204ENST00000428336 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
TSPO-204ENST00000428336 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
TSPO-204ENST00000428336 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
TSPO-204ENST00000428336 ATAD2BQ9ULI0 1458 aa29.65■■■□□ 2.34
TSPO-204ENST00000428336 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
TSPO-204ENST00000428336 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
TSPO-204ENST00000428336 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
TSPO-204ENST00000428336 HMGXB3Q12766 1538 aa29.45■■■□□ 2.3
TSPO-204ENST00000428336 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
TSPO-204ENST00000428336 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
TSPO-204ENST00000428336 BAZ1BQ9UIG0 1483 aaKnown RBP29.35■■■□□ 2.29
TSPO-204ENST00000428336 NESP48681 1621 aa29.1■■■□□ 2.25
TSPO-204ENST00000428336 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
TSPO-204ENST00000428336 WIZO95785 1651 aa29■■■□□ 2.23
TSPO-204ENST00000428336 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
TSPO-204ENST00000428336 CUX2O14529 1486 aa28.95■■■□□ 2.22
TSPO-204ENST00000428336 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
TSPO-204ENST00000428336 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
TSPO-204ENST00000428336 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
TSPO-204ENST00000428336 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
TSPO-204ENST00000428336 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
TSPO-204ENST00000428336 DNAJC5Q9H3Z4 198 aa28.63■■■□□ 2.17
TSPO-204ENST00000428336 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
TSPO-204ENST00000428336 CFTRP13569 1480 aa28.55■■■□□ 2.16
TSPO-204ENST00000428336 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
TSPO-204ENST00000428336 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
TSPO-204ENST00000428336 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
TSPO-204ENST00000428336 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
TSPO-204ENST00000428336 WDR62O43379 1518 aa28.4■■■□□ 2.14
TSPO-204ENST00000428336 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
TSPO-204ENST00000428336 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
TSPO-204ENST00000428336 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
TSPO-204ENST00000428336 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
TSPO-204ENST00000428336 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
TSPO-204ENST00000428336 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
TSPO-204ENST00000428336 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
TSPO-204ENST00000428336 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
TSPO-204ENST00000428336 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
TSPO-204ENST00000428336 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
TSPO-204ENST00000428336 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.02
TSPO-204ENST00000428336 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.012e-6■■■■■ 31.6
TSPO-204ENST00000428336 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
TSPO-204ENST00000428336 SOGA1O94964 1423 aa27.6■■■□□ 2.01
TSPO-204ENST00000428336 CUX1P39880 1505 aa27.6■■■□□ 2.01
TSPO-204ENST00000428336 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
TSPO-204ENST00000428336 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
TSPO-204ENST00000428336 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
TSPO-204ENST00000428336 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
TSPO-204ENST00000428336 FBLN2P98095 1184 aa27.37■■□□□ 1.97
TSPO-204ENST00000428336 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
TSPO-204ENST00000428336 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
TSPO-204ENST00000428336 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
TSPO-204ENST00000428336 CHD1O14646 1710 aa27.28■■□□□ 1.96
TSPO-204ENST00000428336 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
TSPO-204ENST00000428336 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
TSPO-204ENST00000428336 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
TSPO-204ENST00000428336 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
TSPO-204ENST00000428336 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
TSPO-204ENST00000428336 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
TSPO-204ENST00000428336 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
TSPO-204ENST00000428336 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
TSPO-204ENST00000428336 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
TSPO-204ENST00000428336 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
TSPO-204ENST00000428336 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TSPO-204ENST00000428336 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
TSPO-204ENST00000428336 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
TSPO-204ENST00000428336 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
TSPO-204ENST00000428336 PBRM1Q86U86 1689 aa27.08■■□□□ 1.93
TSPO-204ENST00000428336 CLASP1Q7Z460 1538 aa27.07■■□□□ 1.92
TSPO-204ENST00000428336 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
TSPO-204ENST00000428336 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
TSPO-204ENST00000428336 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
TSPO-204ENST00000428336 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
TSPO-204ENST00000428336 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
TSPO-204ENST00000428336 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
TSPO-204ENST00000428336 NUP160Q12769 1436 aa26.87■■□□□ 1.89
TSPO-204ENST00000428336 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
TSPO-204ENST00000428336 IGF1RP08069 1367 aa26.74■■□□□ 1.87
TSPO-204ENST00000428336 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
TSPO-204ENST00000428336 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
TSPO-204ENST00000428336 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
TSPO-204ENST00000428336 TRHP20396 242 aaPredicted RBP26.63■■□□□ 1.85
TSPO-204ENST00000428336 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
TSPO-204ENST00000428336 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms