RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
KDM5C-206ENST00000428012 ABCC9O60706 1549 aa33.01■■■□□ 2.87
KDM5C-206ENST00000428012 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
KDM5C-206ENST00000428012 DNAJC5BQ9UF47 199 aa31.46■■■□□ 2.63
KDM5C-206ENST00000428012 RB1CC1Q8TDY2 1594 aa31.14■■■□□ 2.58
KDM5C-206ENST00000428012 NACADO15069 1562 aa30.84■■■□□ 2.53
KDM5C-206ENST00000428012 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
KDM5C-206ENST00000428012 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
KDM5C-206ENST00000428012 UNC13AQ9UPW8 1703 aa30.55■■■□□ 2.48
KDM5C-206ENST00000428012 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
KDM5C-206ENST00000428012 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
KDM5C-206ENST00000428012 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
KDM5C-206ENST00000428012 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
KDM5C-206ENST00000428012 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
KDM5C-206ENST00000428012 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
KDM5C-206ENST00000428012 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
KDM5C-206ENST00000428012 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
KDM5C-206ENST00000428012 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
KDM5C-206ENST00000428012 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
KDM5C-206ENST00000428012 CUX2O14529 1486 aa28.53■■■□□ 2.16
KDM5C-206ENST00000428012 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
KDM5C-206ENST00000428012 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
KDM5C-206ENST00000428012 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
KDM5C-206ENST00000428012 NESP48681 1621 aa28.29■■■□□ 2.12
KDM5C-206ENST00000428012 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
KDM5C-206ENST00000428012 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
KDM5C-206ENST00000428012 SMARCA2P51531 1590 aa28.22■■■□□ 2.11
KDM5C-206ENST00000428012 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
KDM5C-206ENST00000428012 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
KDM5C-206ENST00000428012 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
KDM5C-206ENST00000428012 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
KDM5C-206ENST00000428012 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
KDM5C-206ENST00000428012 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
KDM5C-206ENST00000428012 KIF21AQ7Z4S6 1674 aa27.85■■■□□ 2.05
KDM5C-206ENST00000428012 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
KDM5C-206ENST00000428012 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
KDM5C-206ENST00000428012 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
KDM5C-206ENST00000428012 MRC2Q9UBG0 1479 aa27.56■■■□□ 2
KDM5C-206ENST00000428012 WIZO95785 1651 aa27.52■■■□□ 2
KDM5C-206ENST00000428012 WDR62O43379 1518 aa27.51■■■□□ 2
KDM5C-206ENST00000428012 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
KDM5C-206ENST00000428012 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
KDM5C-206ENST00000428012 CFTRP13569 1480 aa27.25■■□□□ 1.95
KDM5C-206ENST00000428012 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
KDM5C-206ENST00000428012 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
KDM5C-206ENST00000428012 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
KDM5C-206ENST00000428012 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
KDM5C-206ENST00000428012 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
KDM5C-206ENST00000428012 RIMBP3CA6NJZ7 1639 aa26.92■■□□□ 1.9
KDM5C-206ENST00000428012 RIMBP3BA6NNM3 1639 aa26.92■■□□□ 1.9
KDM5C-206ENST00000428012 RIMBP3Q9UFD9 1639 aa26.92■■□□□ 1.9
KDM5C-206ENST00000428012 PRDM2Q13029 1718 aa26.89■■□□□ 1.9
KDM5C-206ENST00000428012 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
KDM5C-206ENST00000428012 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
KDM5C-206ENST00000428012 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
KDM5C-206ENST00000428012 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
KDM5C-206ENST00000428012 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
KDM5C-206ENST00000428012 CYB5RLQ6IPT4 315 aa26.62■■□□□ 1.85
KDM5C-206ENST00000428012 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.854e-6■■■■□ 20.6
KDM5C-206ENST00000428012 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
KDM5C-206ENST00000428012 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
KDM5C-206ENST00000428012 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
KDM5C-206ENST00000428012 CHD1O14646 1710 aa26.58■■□□□ 1.85
KDM5C-206ENST00000428012 ARAP1Q96P48 1450 aa26.53■■□□□ 1.84
KDM5C-206ENST00000428012 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
KDM5C-206ENST00000428012 FBLN2P98095 1184 aa26.46■■□□□ 1.83
KDM5C-206ENST00000428012 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
KDM5C-206ENST00000428012 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
KDM5C-206ENST00000428012 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
KDM5C-206ENST00000428012 SOGA1O94964 1423 aa26.34■■□□□ 1.81
KDM5C-206ENST00000428012 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
KDM5C-206ENST00000428012 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
KDM5C-206ENST00000428012 FGD5Q6ZNL6 1462 aa26.25■■□□□ 1.79
KDM5C-206ENST00000428012 CUX1P39880 1505 aa26.2■■□□□ 1.79
KDM5C-206ENST00000428012 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
KDM5C-206ENST00000428012 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
KDM5C-206ENST00000428012 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
KDM5C-206ENST00000428012 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
KDM5C-206ENST00000428012 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
KDM5C-206ENST00000428012 SYNJ2O15056 1496 aa26.1■■□□□ 1.77
KDM5C-206ENST00000428012 PBRM1Q86U86 1689 aa26.01■■□□□ 1.75
KDM5C-206ENST00000428012 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
KDM5C-206ENST00000428012 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
KDM5C-206ENST00000428012 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
KDM5C-206ENST00000428012 ERCC6L2Q5T890 1561 aa25.91■■□□□ 1.74
KDM5C-206ENST00000428012 AEBP2Q6ZN18 517 aaPredicted RBP25.87■■□□□ 1.73
KDM5C-206ENST00000428012 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
KDM5C-206ENST00000428012 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
KDM5C-206ENST00000428012 NUP160Q12769 1436 aa25.76■■□□□ 1.71
KDM5C-206ENST00000428012 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
KDM5C-206ENST00000428012 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
KDM5C-206ENST00000428012 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
KDM5C-206ENST00000428012 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
KDM5C-206ENST00000428012 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
KDM5C-206ENST00000428012 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
KDM5C-206ENST00000428012 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
KDM5C-206ENST00000428012 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
KDM5C-206ENST00000428012 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
KDM5C-206ENST00000428012 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
KDM5C-206ENST00000428012 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms