RNA–Protein interactions for RNA: ENST00000428005.1

SLC4A7-204, Transcript of solute carrier family 4 member 7, humanhuman

TSL 1 (best)

Gene SLC4A7, Length 1,572 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7-204ENST00000428005 NISCHQ9Y2I1 1504 aa53.2■■■■■ 6.11
SLC4A7-204ENST00000428005 CCDC180Q9P1Z9 1646 aa47.2■■■■■ 5.15
SLC4A7-204ENST00000428005 ABCC9O60706 1549 aa45.83■■■■■ 4.93
SLC4A7-204ENST00000428005 ZCCHC6Q5VYS8 1495 aaKnown RBP44.37■■■■■ 4.69
SLC4A7-204ENST00000428005 DCAF8L2P0C7V8 631 aa44.36■■■■■ 4.69
SLC4A7-204ENST00000428005 NACADO15069 1562 aa44.28■■■■■ 4.68
SLC4A7-204ENST00000428005 RB1CC1Q8TDY2 1594 aa44.26■■■■■ 4.68
SLC4A7-204ENST00000428005 MYO15BQ96JP2 1530 aa44.1■■■■■ 4.65
SLC4A7-204ENST00000428005 DCAF1Q9Y4B6 1507 aa44.03■■■■■ 4.64
SLC4A7-204ENST00000428005 UNC13AQ9UPW8 1703 aa43.31■■■■■ 4.52
SLC4A7-204ENST00000428005 SCRIBQ14160 1630 aa43.08■■■■■ 4.49
SLC4A7-204ENST00000428005 PABPN1Q86U42 306 aaKnown RBP eCLIP42.87■■■■■ 4.45
SLC4A7-204ENST00000428005 BICRAQ9NZM4 1560 aa42.87■■■■■ 4.45
SLC4A7-204ENST00000428005 SHROOM4Q9ULL8 1493 aa42.46■■■■■ 4.39
SLC4A7-204ENST00000428005 EIF4G1Q04637 1599 aaKnown RBP41.72■■■■■ 4.27
SLC4A7-204ENST00000428005 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
SLC4A7-204ENST00000428005 CC2D2AQ9P2K1 1620 aa41.49■■■■■ 4.23
SLC4A7-204ENST00000428005 CECR2Q9BXF3 1484 aa41.39■■■■■ 4.22
SLC4A7-204ENST00000428005 SMARCA4P51532 1647 aa41.23■■■■■ 4.19
SLC4A7-204ENST00000428005 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
SLC4A7-204ENST00000428005 MROH2BQ7Z745 1585 aa41■■■■■ 4.15
SLC4A7-204ENST00000428005 SMARCA2P51531 1590 aa40.9■■■■■ 4.14
SLC4A7-204ENST00000428005 ATAD2BQ9ULI0 1458 aa40.89■■■■■ 4.14
SLC4A7-204ENST00000428005 NCAPD3P42695 1498 aa40.82■■■■■ 4.12
SLC4A7-204ENST00000428005 PEG3Q9GZU2 1588 aa40.8■■■■■ 4.12
SLC4A7-204ENST00000428005 HMGXB3Q12766 1538 aa40.67■■■■■ 4.1
SLC4A7-204ENST00000428005 RSF1Q96T23 1441 aaPredicted RBP40.64■■■■■ 4.1
SLC4A7-204ENST00000428005 WIZO95785 1651 aa40.61■■■■■ 4.09
SLC4A7-204ENST00000428005 BAZ1BQ9UIG0 1483 aaKnown RBP40.61■■■■■ 4.09
SLC4A7-204ENST00000428005 SUPT5HO00267 1087 aaKnown RBP40.46■■■■■ 4.07
SLC4A7-204ENST00000428005 TOP2AP11388 1531 aaKnown RBP40.18■■■■■ 4.02
SLC4A7-204ENST00000428005 NESP48681 1621 aa39.75■■■■□ 3.95
SLC4A7-204ENST00000428005 LAMC3Q9Y6N6 1575 aa39.73■■■■□ 3.95
SLC4A7-204ENST00000428005 CCDC88BA6NC98 1476 aa39.7■■■■□ 3.95
SLC4A7-204ENST00000428005 CADPSQ9ULU8 1353 aa39.66■■■■□ 3.94
SLC4A7-204ENST00000428005 ERCC6Q03468 1493 aa39.51■■■■□ 3.92
SLC4A7-204ENST00000428005 CFTRP13569 1480 aa39.49■■■■□ 3.91
SLC4A7-204ENST00000428005 PDS5BQ9NTI5 1447 aa39.45■■■■□ 3.91
SLC4A7-204ENST00000428005 KIF21AQ7Z4S6 1674 aa39.34■■■■□ 3.89
SLC4A7-204ENST00000428005 PRDM2Q13029 1718 aa39.33■■■■□ 3.89
SLC4A7-204ENST00000428005 FANCD2Q9BXW9 1451 aa39.21■■■■□ 3.87
SLC4A7-204ENST00000428005 CEP164Q9UPV0 1460 aa39.14■■■■□ 3.86
SLC4A7-204ENST00000428005 THOC2Q8NI27 1593 aaKnown RBP39.09■■■■□ 3.85
SLC4A7-204ENST00000428005 MRC2Q9UBG0 1479 aa39.01■■■■□ 3.84
SLC4A7-204ENST00000428005 CUX2O14529 1486 aa38.95■■■■□ 3.83
SLC4A7-204ENST00000428005 WDR62O43379 1518 aa38.86■■■■□ 3.81
SLC4A7-204ENST00000428005 URB2Q14146 1524 aaKnown RBP38.79■■■■□ 3.8
SLC4A7-204ENST00000428005 ABCC8Q09428 1581 aa38.66■■■■□ 3.78
SLC4A7-204ENST00000428005 TOPBP1Q92547 1522 aa38.63■■■■□ 3.77
SLC4A7-204ENST00000428005 DNMBPQ6XZF7 1577 aa38.63■■■■□ 3.77
SLC4A7-204ENST00000428005 CUX1P39880 1505 aa38.45■■■■□ 3.75
SLC4A7-204ENST00000428005 CHIC1Q5VXU3 224 aa38.44■■■■□ 3.74
SLC4A7-204ENST00000428005 WRNQ14191 1432 aaPredicted RBP eCLIP38.34■■■■□ 3.73
SLC4A7-204ENST00000428005 POLA1P09884 1462 aaPredicted RBP38.31■■■■□ 3.72
SLC4A7-204ENST00000428005 IFT140Q96RY7 1462 aa38.3■■■■□ 3.72
SLC4A7-204ENST00000428005 FGD5Q6ZNL6 1462 aa38.28■■■■□ 3.72
SLC4A7-204ENST00000428005 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
SLC4A7-204ENST00000428005 BIVM-ERCC5R4GMW8 1640 aa38.23■■■■□ 3.71
SLC4A7-204ENST00000428005 SYNJ1O43426 1573 aa38.22■■■■□ 3.71
SLC4A7-204ENST00000428005 TRIM41Q8WV44 630 aa38.21■■■■□ 3.71
SLC4A7-204ENST00000428005 TARBP1Q13395 1621 aaKnown RBP38.18■■■■□ 3.7
SLC4A7-204ENST00000428005 SOGA1O94964 1423 aa38.17■■■■□ 3.7
SLC4A7-204ENST00000428005 RAD54L2Q9Y4B4 1467 aa38.14■■■■□ 3.7
SLC4A7-204ENST00000428005 ZNF608Q9ULD9 1512 aaPredicted RBP38.08■■■■□ 3.69
SLC4A7-204ENST00000428005 EIF4G3O43432 1585 aaKnown RBP37.98■■■■□ 3.67
SLC4A7-204ENST00000428005 WDR97A6NE52 1622 aa37.96■■■■□ 3.67
SLC4A7-204ENST00000428005 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
SLC4A7-204ENST00000428005 AQRO60306 1485 aaKnown RBP eCLIP37.92■■■■□ 3.667e-6■■□□□ 13.1
SLC4A7-204ENST00000428005 TDRD9Q8NDG6 1382 aaKnown RBP37.91■■■■□ 3.66
SLC4A7-204ENST00000428005 ABCA5Q8WWZ7 1642 aa37.75■■■■□ 3.63
SLC4A7-204ENST00000428005 GAPVD1Q14C86 1478 aa37.74■■■■□ 3.63
SLC4A7-204ENST00000428005 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
SLC4A7-204ENST00000428005 GRIN2BQ13224 1484 aa37.69■■■■□ 3.62
SLC4A7-204ENST00000428005 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
SLC4A7-204ENST00000428005 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
SLC4A7-204ENST00000428005 EEA1Q15075 1411 aa37.53■■■■□ 3.6
SLC4A7-204ENST00000428005 KIF27Q86VH2 1401 aa37.53■■■■□ 3.6
SLC4A7-204ENST00000428005 ERICH3Q5RHP9 1530 aa37.49■■■■□ 3.59
SLC4A7-204ENST00000428005 CHD1O14646 1710 aa37.49■■■■□ 3.59
SLC4A7-204ENST00000428005 FBLN2P98095 1184 aa37.45■■■■□ 3.59
SLC4A7-204ENST00000428005 OSCARQ8IYS5 282 aa37.41■■■■□ 3.58
SLC4A7-204ENST00000428005 SYNJ2O15056 1496 aa37.4■■■■□ 3.58
SLC4A7-204ENST00000428005 CHMP7Q8WUX9 453 aaPredicted RBP37.38■■■■□ 3.58
SLC4A7-204ENST00000428005 ADAMTS12P58397 1594 aa37.37■■■■□ 3.57
SLC4A7-204ENST00000428005 DNAJC5Q9H3Z4 198 aa37.35■■■■□ 3.57
SLC4A7-204ENST00000428005 FAM9AQ8IZU1 332 aaPredicted RBP37.34■■■■□ 3.57
SLC4A7-204ENST00000428005 FHAD1B1AJZ9 1412 aa37.32■■■■□ 3.56
SLC4A7-204ENST00000428005 IGF1RP08069 1367 aa37.3■■■■□ 3.56
SLC4A7-204ENST00000428005 RUSC2Q8N2Y8 1516 aa37.25■■■■□ 3.55
SLC4A7-204ENST00000428005 CUL7Q14999 1698 aa37.24■■■■□ 3.55
SLC4A7-204ENST00000428005 GRIN2AQ12879 1464 aa37.21■■■■□ 3.55
SLC4A7-204ENST00000428005 CSRNP3Q8WYN3 585 aa37.18■■■■□ 3.54
SLC4A7-204ENST00000428005 CARMIL1Q5VZK9 1371 aa37.1■■■■□ 3.53
SLC4A7-204ENST00000428005 KIF21BO75037 1637 aa37.02■■■■□ 3.52
SLC4A7-204ENST00000428005 CLASP1Q7Z460 1538 aa37.02■■■■□ 3.52
SLC4A7-204ENST00000428005 NUP160Q12769 1436 aa37.01■■■■□ 3.51
SLC4A7-204ENST00000428005 CEP170Q5SW79 1584 aa37■■■■□ 3.51
SLC4A7-204ENST00000428005 RAPGEF2Q9Y4G8 1499 aa36.93■■■■□ 3.5
SLC4A7-204ENST00000428005 GOLGA3Q08378 1498 aa36.91■■■■□ 3.5
SLC4A7-204ENST00000428005 PRXQ9BXM0 1461 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms