RNA–Protein interactions for RNA: ENST00000427825.1

AC104461.1-204, humanhuman

TSL 3

Gene AC104461.1, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104461.1-204ENST00000427825 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
AC104461.1-204ENST00000427825 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
AC104461.1-204ENST00000427825 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
AC104461.1-204ENST00000427825 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
AC104461.1-204ENST00000427825 FOXD1Q16676 465 aa20.22■□□□□ 0.83
AC104461.1-204ENST00000427825 MSH5O43196 834 aa19.19■□□□□ 0.66
AC104461.1-204ENST00000427825 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
AC104461.1-204ENST00000427825 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
AC104461.1-204ENST00000427825 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
AC104461.1-204ENST00000427825 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
AC104461.1-204ENST00000427825 ADRA2BP18089 450 aa18.57■□□□□ 0.56
AC104461.1-204ENST00000427825 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
AC104461.1-204ENST00000427825 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
AC104461.1-204ENST00000427825 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
AC104461.1-204ENST00000427825 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
AC104461.1-204ENST00000427825 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
AC104461.1-204ENST00000427825 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
AC104461.1-204ENST00000427825 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
AC104461.1-204ENST00000427825 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
AC104461.1-204ENST00000427825 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
AC104461.1-204ENST00000427825 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
AC104461.1-204ENST00000427825 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
AC104461.1-204ENST00000427825 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
AC104461.1-204ENST00000427825 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
AC104461.1-204ENST00000427825 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
AC104461.1-204ENST00000427825 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
AC104461.1-204ENST00000427825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
AC104461.1-204ENST00000427825 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
AC104461.1-204ENST00000427825 ABCC9O60706 1549 aa15.45■□□□□ 0.06
AC104461.1-204ENST00000427825 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
AC104461.1-204ENST00000427825 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
AC104461.1-204ENST00000427825 CAPN15O75808 1086 aa15.19■□□□□ 0.02
AC104461.1-204ENST00000427825 DSG3P32926 999 aa15.11■□□□□ 0.01
AC104461.1-204ENST00000427825 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
AC104461.1-204ENST00000427825 APLP2Q06481 763 aa15.05■□□□□ -0
AC104461.1-204ENST00000427825 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
AC104461.1-204ENST00000427825 KCNA4P22459 653 aa14.95□□□□□ -0.02
AC104461.1-204ENST00000427825 POTEHQ6S545 545 aa14.95□□□□□ -0.02
AC104461.1-204ENST00000427825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
AC104461.1-204ENST00000427825 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
AC104461.1-204ENST00000427825 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
AC104461.1-204ENST00000427825 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
AC104461.1-204ENST00000427825 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
AC104461.1-204ENST00000427825 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
AC104461.1-204ENST00000427825 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
AC104461.1-204ENST00000427825 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
AC104461.1-204ENST00000427825 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
AC104461.1-204ENST00000427825 NACADO15069 1562 aa14.73□□□□□ -0.05
AC104461.1-204ENST00000427825 ABCB7O75027 752 aa14.73□□□□□ -0.05
AC104461.1-204ENST00000427825 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
AC104461.1-204ENST00000427825 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
AC104461.1-204ENST00000427825 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
AC104461.1-204ENST00000427825 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
AC104461.1-204ENST00000427825 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
AC104461.1-204ENST00000427825 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
AC104461.1-204ENST00000427825 POLA2Q14181 598 aa14.37□□□□□ -0.11
AC104461.1-204ENST00000427825 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
AC104461.1-204ENST00000427825 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
AC104461.1-204ENST00000427825 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
AC104461.1-204ENST00000427825 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
AC104461.1-204ENST00000427825 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
AC104461.1-204ENST00000427825 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
AC104461.1-204ENST00000427825 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
AC104461.1-204ENST00000427825 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
AC104461.1-204ENST00000427825 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
AC104461.1-204ENST00000427825 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
AC104461.1-204ENST00000427825 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
AC104461.1-204ENST00000427825 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
AC104461.1-204ENST00000427825 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
AC104461.1-204ENST00000427825 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
AC104461.1-204ENST00000427825 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
AC104461.1-204ENST00000427825 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
AC104461.1-204ENST00000427825 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
AC104461.1-204ENST00000427825 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
AC104461.1-204ENST00000427825 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
AC104461.1-204ENST00000427825 WIZO95785 1651 aa13.8□□□□□ -0.2
AC104461.1-204ENST00000427825 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
AC104461.1-204ENST00000427825 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
AC104461.1-204ENST00000427825 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
AC104461.1-204ENST00000427825 HAX1O00165 279 aa13.72□□□□□ -0.21
AC104461.1-204ENST00000427825 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC104461.1-204ENST00000427825 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
AC104461.1-204ENST00000427825 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
AC104461.1-204ENST00000427825 FBLN2P98095 1184 aa13.7□□□□□ -0.22
AC104461.1-204ENST00000427825 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
AC104461.1-204ENST00000427825 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
AC104461.1-204ENST00000427825 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
AC104461.1-204ENST00000427825 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
AC104461.1-204ENST00000427825 ZBTB22O15209 634 aa13.65□□□□□ -0.22
AC104461.1-204ENST00000427825 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
AC104461.1-204ENST00000427825 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
AC104461.1-204ENST00000427825 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
AC104461.1-204ENST00000427825 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
AC104461.1-204ENST00000427825 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
AC104461.1-204ENST00000427825 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
AC104461.1-204ENST00000427825 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
AC104461.1-204ENST00000427825 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
AC104461.1-204ENST00000427825 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
AC104461.1-204ENST00000427825 EVX2Q03828 476 aa13.36□□□□□ -0.27
AC104461.1-204ENST00000427825 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms