RNA–Protein interactions for RNA: ENST00000427800.2

CBX8-203, Transcript of chromobox 8, humanhuman

TSL 2

Gene CBX8, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-203ENST00000427800 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
CBX8-203ENST00000427800 CCDC180Q9P1Z9 1646 aa42.32■■■■■ 4.37
CBX8-203ENST00000427800 ABCC9O60706 1549 aa41.44■■■■■ 4.22
CBX8-203ENST00000427800 RB1CC1Q8TDY2 1594 aa39.89■■■■□ 3.98
CBX8-203ENST00000427800 NACADO15069 1562 aa39.82■■■■□ 3.97
CBX8-203ENST00000427800 DCAF8L2P0C7V8 631 aa39.64■■■■□ 3.94
CBX8-203ENST00000427800 MYO15BQ96JP2 1530 aa39.57■■■■□ 3.93
CBX8-203ENST00000427800 ZCCHC6Q5VYS8 1495 aaKnown RBP39.48■■■■□ 3.91
CBX8-203ENST00000427800 DCAF1Q9Y4B6 1507 aa39.32■■■■□ 3.89
CBX8-203ENST00000427800 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
CBX8-203ENST00000427800 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.78
CBX8-203ENST00000427800 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
CBX8-203ENST00000427800 SCRIBQ14160 1630 aa38.49■■■■□ 3.75
CBX8-203ENST00000427800 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
CBX8-203ENST00000427800 DNAJC5BQ9UF47 199 aa38.18■■■■□ 3.7
CBX8-203ENST00000427800 EIF4G1Q04637 1599 aaKnown RBP37.64■■■■□ 3.62
CBX8-203ENST00000427800 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
CBX8-203ENST00000427800 CECR2Q9BXF3 1484 aa37.28■■■■□ 3.56
CBX8-203ENST00000427800 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
CBX8-203ENST00000427800 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
CBX8-203ENST00000427800 NCAPD3P42695 1498 aa36.73■■■■□ 3.47
CBX8-203ENST00000427800 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
CBX8-203ENST00000427800 SMARCA2P51531 1590 aa36.67■■■■□ 3.46
CBX8-203ENST00000427800 PEG3Q9GZU2 1588 aa36.54■■■■□ 3.44
CBX8-203ENST00000427800 HMGXB3Q12766 1538 aa36.53■■■■□ 3.44
CBX8-203ENST00000427800 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
CBX8-203ENST00000427800 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
CBX8-203ENST00000427800 WIZO95785 1651 aa36.14■■■■□ 3.38
CBX8-203ENST00000427800 RSF1Q96T23 1441 aaPredicted RBP36.06■■■■□ 3.36
CBX8-203ENST00000427800 NESP48681 1621 aa35.8■■■■□ 3.32
CBX8-203ENST00000427800 LAMC3Q9Y6N6 1575 aa35.8■■■■□ 3.32
CBX8-203ENST00000427800 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
CBX8-203ENST00000427800 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
CBX8-203ENST00000427800 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
CBX8-203ENST00000427800 PDS5BQ9NTI5 1447 aa35.55■■■■□ 3.28
CBX8-203ENST00000427800 CUX2O14529 1486 aa35.5■■■■□ 3.27
CBX8-203ENST00000427800 KIF21AQ7Z4S6 1674 aa35.44■■■■□ 3.26
CBX8-203ENST00000427800 CFTRP13569 1480 aa35.39■■■■□ 3.26
CBX8-203ENST00000427800 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
CBX8-203ENST00000427800 CCDC88BA6NC98 1476 aa35.33■■■■□ 3.25
CBX8-203ENST00000427800 FANCD2Q9BXW9 1451 aa35.2■■■■□ 3.23
CBX8-203ENST00000427800 PRDM2Q13029 1718 aa35.18■■■■□ 3.22
CBX8-203ENST00000427800 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
CBX8-203ENST00000427800 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
CBX8-203ENST00000427800 WDR62O43379 1518 aa35.06■■■■□ 3.2
CBX8-203ENST00000427800 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
CBX8-203ENST00000427800 URB2Q14146 1524 aaKnown RBP34.84■■■■□ 3.17
CBX8-203ENST00000427800 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
CBX8-203ENST00000427800 TOPBP1Q92547 1522 aa34.62■■■■□ 3.13
CBX8-203ENST00000427800 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
CBX8-203ENST00000427800 DNMBPQ6XZF7 1577 aa34.58■■■■□ 3.13
CBX8-203ENST00000427800 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
CBX8-203ENST00000427800 POLA1P09884 1462 aaPredicted RBP34.3■■■■□ 3.08
CBX8-203ENST00000427800 TARBP1Q13395 1621 aaKnown RBP34.28■■■■□ 3.08
CBX8-203ENST00000427800 CUX1P39880 1505 aa34.28■■■■□ 3.08
CBX8-203ENST00000427800 ZNF608Q9ULD9 1512 aaPredicted RBP34.26■■■■□ 3.08
CBX8-203ENST00000427800 FGD5Q6ZNL6 1462 aa34.19■■■■□ 3.06
CBX8-203ENST00000427800 SOGA1O94964 1423 aa34.18■■■■□ 3.06
CBX8-203ENST00000427800 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
CBX8-203ENST00000427800 RAD54L2Q9Y4B4 1467 aa34.13■■■■□ 3.05
CBX8-203ENST00000427800 WDR97A6NE52 1622 aa34.07■■■■□ 3.04
CBX8-203ENST00000427800 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.041e-7■■■■■ 31.7
CBX8-203ENST00000427800 WRNQ14191 1432 aaPredicted RBP eCLIP34.01■■■■□ 3.03
CBX8-203ENST00000427800 OSCARQ8IYS5 282 aa34■■■■□ 3.03
CBX8-203ENST00000427800 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
CBX8-203ENST00000427800 TOP2BQ02880 1626 aa33.99■■■■□ 3.03
CBX8-203ENST00000427800 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
CBX8-203ENST00000427800 SYNJ1O43426 1573 aa33.92■■■■□ 3.02
CBX8-203ENST00000427800 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
CBX8-203ENST00000427800 GRIN2BQ13224 1484 aa33.8■■■■□ 3
CBX8-203ENST00000427800 GAPVD1Q14C86 1478 aa33.78■■■■□ 3
CBX8-203ENST00000427800 CHD1O14646 1710 aa33.78■■■■□ 3
CBX8-203ENST00000427800 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
CBX8-203ENST00000427800 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
CBX8-203ENST00000427800 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
CBX8-203ENST00000427800 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
CBX8-203ENST00000427800 FBLN2P98095 1184 aa33.66■■■□□ 2.98
CBX8-203ENST00000427800 SYNJ2O15056 1496 aa33.61■■■□□ 2.97
CBX8-203ENST00000427800 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
CBX8-203ENST00000427800 ERICH3Q5RHP9 1530 aa33.5■■■□□ 2.95
CBX8-203ENST00000427800 RIMBP3CA6NJZ7 1639 aa33.44■■■□□ 2.94
CBX8-203ENST00000427800 RIMBP3BA6NNM3 1639 aa33.44■■■□□ 2.94
CBX8-203ENST00000427800 RIMBP3Q9UFD9 1639 aa33.44■■■□□ 2.94
CBX8-203ENST00000427800 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
CBX8-203ENST00000427800 ARHGEF11O15085 1522 aa33.4■■■□□ 2.94
CBX8-203ENST00000427800 CLASP1Q7Z460 1538 aa33.4■■■□□ 2.94
CBX8-203ENST00000427800 FHAD1B1AJZ9 1412 aa33.39■■■□□ 2.94
CBX8-203ENST00000427800 GRIN2AQ12879 1464 aa33.36■■■□□ 2.93
CBX8-203ENST00000427800 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
CBX8-203ENST00000427800 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
CBX8-203ENST00000427800 NUP160Q12769 1436 aa33.23■■■□□ 2.91
CBX8-203ENST00000427800 IGF1RP08069 1367 aa33.21■■■□□ 2.91
CBX8-203ENST00000427800 CEP170Q5SW79 1584 aa33.18■■■□□ 2.9
CBX8-203ENST00000427800 CUL7Q14999 1698 aa33.17■■■□□ 2.9
CBX8-203ENST00000427800 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
CBX8-203ENST00000427800 CYB5RLQ6IPT4 315 aa33.09■■■□□ 2.89
CBX8-203ENST00000427800 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
CBX8-203ENST00000427800 CARMIL1Q5VZK9 1371 aa33.01■■■□□ 2.88
CBX8-203ENST00000427800 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
CBX8-203ENST00000427800 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms