RNA–Protein interactions for RNA: ENST00000427764.3

HNRNPR-204, Transcript of heterogeneous nuclear ribonucleoprotein R, humanhuman

TSL 1 (best) BASIC

Gene HNRNPR, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPR-204ENST00000427764 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■■■■ 60.1
HNRNPR-204ENST00000427764 AQRO60306 1485 aaKnown RBP eCLIP26.18■■□□□ 1.783e-10■■■■■ 45.9
HNRNPR-204ENST00000427764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.353e-8■■■■■ 35.1
HNRNPR-204ENST00000427764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.42■□□□□ 0.541e-15■■■■■ 32.5
HNRNPR-204ENST00000427764 RBM22Q9NW64 420 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■■■■■ 28.1
HNRNPR-204ENST00000427764 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■■■■■ 27.8
HNRNPR-204ENST00000427764 TRA2AQ13595 282 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■■□ 25.6
HNRNPR-204ENST00000427764 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.215e-8■■■■□ 24.8
HNRNPR-204ENST00000427764 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.591e-7■■■■□ 24.5
HNRNPR-204ENST00000427764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■■■■□ 24.1
HNRNPR-204ENST00000427764 ILF3Q12906 894 aaKnown RBP eCLIP15.22■□□□□ 0.037e-7■■■■□ 24
HNRNPR-204ENST00000427764 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.3■□□□□ 0.044e-6■■■■□ 22.9
HNRNPR-204ENST00000427764 TAF15Q92804 592 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 21.7
HNRNPR-204ENST00000427764 LSM11P83369 360 aaKnown RBP eCLIP13.87□□□□□ -0.196e-6■■■■□ 21.3
HNRNPR-204ENST00000427764 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.195e-7■■■■□ 19.9
HNRNPR-204ENST00000427764 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.661e-7■■■□□ 19.1
HNRNPR-204ENST00000427764 NIPBLQ6KC79 2804 aaeCLIP12.58□□□□□ -0.43e-7■■■□□ 18.1
HNRNPR-204ENST00000427764 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.133e-12■■■□□ 17.1
HNRNPR-204ENST00000427764 PCBP2Q15366 365 aaKnown RBP eCLIP14.9□□□□□ -0.023e-9■■■□□ 17.1
HNRNPR-204ENST00000427764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■□□ 16.9
HNRNPR-204ENST00000427764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.299e-8■■■□□ 16.5
HNRNPR-204ENST00000427764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.38□□□□□ -0.116e-7■■■□□ 16.4
HNRNPR-204ENST00000427764 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.226e-9■■■□□ 16.3
HNRNPR-204ENST00000427764 TIA1P31483 386 aaKnown RBP eCLIP14.58□□□□□ -0.082e-6■■■□□ 16.2
HNRNPR-204ENST00000427764 HNRNPCP07910 306 aaKnown RBP eCLIP11.72□□□□□ -0.536e-7■■■□□ 16.2
HNRNPR-204ENST00000427764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.894e-8■■■□□ 15.4
HNRNPR-204ENST00000427764 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.46e-9■■■□□ 15.2
HNRNPR-204ENST00000427764 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.186e-9■■□□□ 14.1
HNRNPR-204ENST00000427764 LARP4Q71RC2 724 aaKnown RBP eCLIP14.58□□□□□ -0.081e-6■■□□□ 13.8
HNRNPR-204ENST00000427764 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.381e-14■■□□□ 13.4
HNRNPR-204ENST00000427764 FMR1Q06787 632 aaKnown RBP eCLIP18.5■□□□□ 0.554e-9■■□□□ 12.8
HNRNPR-204ENST00000427764 EFTUD2Q15029 972 aaKnown RBP eCLIP15.24■□□□□ 0.035e-6■■□□□ 12.7
HNRNPR-204ENST00000427764 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.42■□□□□ 0.548e-6■■□□□ 11.7
HNRNPR-204ENST00000427764 RBM15Q96T37 977 aaKnown RBP eCLIP15.61■□□□□ 0.093e-10■■□□□ 11.4
HNRNPR-204ENST00000427764 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.424e-14■□□□□ 11.3
HNRNPR-204ENST00000427764 ZNF622Q969S3 477 aaKnown RBP eCLIP19.37■□□□□ 0.692e-11■□□□□ 11
HNRNPR-204ENST00000427764 DDX3XO00571 662 aaKnown RBP eCLIP16.27■□□□□ 0.24e-17■□□□□ 10.6
HNRNPR-204ENST00000427764 PUM1Q14671 1186 aaKnown RBP eCLIP15□□□□□ -0.012e-10■□□□□ 10
HNRNPR-204ENST00000427764 PRPF4O43172 522 aaKnown RBP eCLIP14.9□□□□□ -0.024e-9■□□□□ 9.8
HNRNPR-204ENST00000427764 BUD13Q9BRD0 619 aaKnown RBP eCLIP17■□□□□ 0.311e-7■□□□□ 9.6
HNRNPR-204ENST00000427764 HNRNPLP14866 589 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■□□□□ 9.4
HNRNPR-204ENST00000427764 AGGF1Q8N302 714 aaeCLIP15.42■□□□□ 0.061e-8■□□□□ 9.1
HNRNPR-204ENST00000427764 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.15■□□□□ 0.185e-6■□□□□ 8.8
HNRNPR-204ENST00000427764 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.321e-16■□□□□ 8.7
HNRNPR-204ENST00000427764 CPSF6Q16630 551 aaKnown RBP eCLIP14.75□□□□□ -0.051e-7■□□□□ 8.5
HNRNPR-204ENST00000427764 HNRNPKP61978 463 aaKnown RBP eCLIP15.27■□□□□ 0.041e-7■□□□□ 8.5
HNRNPR-204ENST00000427764 RBFOX2O43251 390 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■□□□□ 8.4
HNRNPR-204ENST00000427764 HLTFQ14527 1009 aaKnown RBP eCLIP15.38■□□□□ 0.058e-8■□□□□ 8.1
HNRNPR-204ENST00000427764 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.261e-17■□□□□ 8.1
Retrieved 49 of 49 RNA–protein pairs in 17.7 ms