RNA–Protein interactions for RNA: ENST00000427738.7

CYLD-203, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5 BASIC

Gene CYLD, Length 8,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-203ENST00000427738 MYT1Q01538 1121 aa11.22□□□□□ -0.61
CYLD-203ENST00000427738 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
CYLD-203ENST00000427738 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
CYLD-203ENST00000427738 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
CYLD-203ENST00000427738 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
CYLD-203ENST00000427738 CENPBP07199 599 aaPredicted RBP10.43□□□□□ -0.74
CYLD-203ENST00000427738 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
CYLD-203ENST00000427738 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
CYLD-203ENST00000427738 YTHDC1Q96MU7 727 aaKnown RBP10.26□□□□□ -0.77
CYLD-203ENST00000427738 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
CYLD-203ENST00000427738 APLP2Q06481 763 aa10.15□□□□□ -0.78
CYLD-203ENST00000427738 NEFLP07196 543 aa10.05□□□□□ -0.8
CYLD-203ENST00000427738 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
CYLD-203ENST00000427738 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
CYLD-203ENST00000427738 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
CYLD-203ENST00000427738 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
CYLD-203ENST00000427738 HRCP23327 699 aa9.75□□□□□ -0.85
CYLD-203ENST00000427738 GLIPR1L2Q4G1C9 344 aa9.73□□□□□ -0.85
CYLD-203ENST00000427738 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
CYLD-203ENST00000427738 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
CYLD-203ENST00000427738 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
CYLD-203ENST00000427738 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
CYLD-203ENST00000427738 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
CYLD-203ENST00000427738 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
CYLD-203ENST00000427738 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
CYLD-203ENST00000427738 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
CYLD-203ENST00000427738 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
CYLD-203ENST00000427738 DIEXFQ68CQ4 756 aaKnown RBP9.41□□□□□ -0.9
CYLD-203ENST00000427738 CDK11AQ9UQ88 783 aaPredicted RBP9.41□□□□□ -0.9
CYLD-203ENST00000427738 NISCHQ9Y2I1 1504 aa9.41□□□□□ -0.9
CYLD-203ENST00000427738 ZBTB47Q9UFB7 747 aaPredicted RBP9.37□□□□□ -0.91
CYLD-203ENST00000427738 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
CYLD-203ENST00000427738 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
CYLD-203ENST00000427738 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
CYLD-203ENST00000427738 RANGAP1P46060 587 aaPredicted RBP9.31□□□□□ -0.92
CYLD-203ENST00000427738 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
CYLD-203ENST00000427738 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
CYLD-203ENST00000427738 SLC4A1APQ9BWU0 796 aaKnown RBP9.28□□□□□ -0.92
CYLD-203ENST00000427738 NEFMP07197 916 aa9.27□□□□□ -0.93
CYLD-203ENST00000427738 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
CYLD-203ENST00000427738 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
CYLD-203ENST00000427738 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
CYLD-203ENST00000427738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
CYLD-203ENST00000427738 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
CYLD-203ENST00000427738 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
CYLD-203ENST00000427738 ANP32EQ9BTT0 268 aa9.13□□□□□ -0.95
CYLD-203ENST00000427738 CDK11BP21127 795 aaKnown RBP9.12□□□□□ -0.95
CYLD-203ENST00000427738 BCANQ96GW7 911 aa9.11□□□□□ -0.95
CYLD-203ENST00000427738 TRIM44Q96DX7 344 aaPredicted RBP9.11□□□□□ -0.95
CYLD-203ENST00000427738 ANP32CO43423 234 aa9.09□□□□□ -0.95
CYLD-203ENST00000427738 BCL11AQ9H165 835 aa9.09□□□□□ -0.95
CYLD-203ENST00000427738 ERICH6BQ5W0A0 696 aa9.08□□□□□ -0.96
CYLD-203ENST00000427738 CANXP27824 592 aaKnown RBP9.07□□□□□ -0.96
CYLD-203ENST00000427738 CHIC1Q5VXU3 224 aa9.06□□□□□ -0.96
CYLD-203ENST00000427738 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
CYLD-203ENST00000427738 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
CYLD-203ENST00000427738 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
CYLD-203ENST00000427738 SCAF1Q9H7N4 1312 aaKnown RBP9□□□□□ -0.97
CYLD-203ENST00000427738 CNGB1Q14028 1251 aaPredicted RBP8.99□□□□□ -0.97
CYLD-203ENST00000427738 NBR1Q14596 966 aa8.99□□□□□ -0.97
CYLD-203ENST00000427738 ITGAEP38570 1179 aa8.99□□□□□ -0.97
CYLD-203ENST00000427738 FKBP8Q14318 412 aa8.95□□□□□ -0.98
CYLD-203ENST00000427738 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
CYLD-203ENST00000427738 NPM2Q86SE8 214 aaKnown RBP8.95□□□□□ -0.98
CYLD-203ENST00000427738 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
CYLD-203ENST00000427738 PPM1GO15355 546 aaPredicted RBP8.91□□□□□ -0.98
CYLD-203ENST00000427738 NAP1L5Q96NT1 182 aaPredicted RBP8.88□□□□□ -0.99
CYLD-203ENST00000427738 BECN1Q14457 450 aa8.87□□□□□ -0.99
CYLD-203ENST00000427738 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
CYLD-203ENST00000427738 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
CYLD-203ENST00000427738 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
CYLD-203ENST00000427738 CCDC136Q96JN2 1154 aa8.84□□□□□ -0.99
CYLD-203ENST00000427738 GOLGA6L22H0YM25 854 aa8.83□□□□□ -1
CYLD-203ENST00000427738 FAM50AQ14320 339 aaKnown RBP8.81□□□□□ -1
CYLD-203ENST00000427738 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
CYLD-203ENST00000427738 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.79□□□□□ -1
CYLD-203ENST00000427738 L1TD1Q5T7N2 865 aaKnown RBP8.79□□□□□ -1
CYLD-203ENST00000427738 PTMSP20962 102 aa8.78□□□□□ -1
CYLD-203ENST00000427738 ESF1Q9H501 851 aaKnown RBP8.78□□□□□ -1
CYLD-203ENST00000427738 NOP58Q9Y2X3 529 aaKnown RBP8.78□□□□□ -1
CYLD-203ENST00000427738 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
CYLD-203ENST00000427738 DNTTIP2Q5QJE6 756 aaKnown RBP8.77□□□□□ -1.01
CYLD-203ENST00000427738 DEKP35659 375 aaKnown RBP8.77□□□□□ -1.01
CYLD-203ENST00000427738 MYH16Q9H6N6 1097 aa8.76□□□□□ -1.01
CYLD-203ENST00000427738 CHAF1AQ13111 956 aaPredicted RBP8.76□□□□□ -1.01
CYLD-203ENST00000427738 HNRNPUQ00839 825 aaKnown RBP eCLIP8.76□□□□□ -1.01
CYLD-203ENST00000427738 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
CYLD-203ENST00000427738 PTMAP06454 111 aaKnown RBP8.74□□□□□ -1.01
CYLD-203ENST00000427738 ARXQ96QS3 562 aa8.74□□□□□ -1.01
CYLD-203ENST00000427738 CCDC180Q9P1Z9 1646 aa8.73□□□□□ -1.01
CYLD-203ENST00000427738 GOLGA6L6A8MZA4 724 aa8.73□□□□□ -1.01
CYLD-203ENST00000427738 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
CYLD-203ENST00000427738 TNNT3P45378 269 aaPredicted RBP8.71□□□□□ -1.02
CYLD-203ENST00000427738 MSNP26038 577 aaKnown RBP8.7□□□□□ -1.02
CYLD-203ENST00000427738 ARID4BQ4LE39 1312 aaPredicted RBP8.7□□□□□ -1.02
CYLD-203ENST00000427738 NRDCO43847 1150 aa8.7□□□□□ -1.02
CYLD-203ENST00000427738 PNNQ9H307 717 aaKnown RBP8.68□□□□□ -1.02
CYLD-203ENST00000427738 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
CYLD-203ENST00000427738 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
CYLD-203ENST00000427738 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms