RNA–Protein interactions for RNA: ENST00000427305.2

TRIM64FP-201, Transcript of tripartite motif containing 64F, pseudogene, humanhuman

BASIC

Gene TRIM64FP, Length 1,371 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM64FP-201ENST00000427305 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
TRIM64FP-201ENST00000427305 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
TRIM64FP-201ENST00000427305 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
TRIM64FP-201ENST00000427305 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
TRIM64FP-201ENST00000427305 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
TRIM64FP-201ENST00000427305 FOXD1Q16676 465 aa23.61■■□□□ 1.37
TRIM64FP-201ENST00000427305 POTEDQ86YR6 584 aa23.36■■□□□ 1.33
TRIM64FP-201ENST00000427305 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
TRIM64FP-201ENST00000427305 MSH5O43196 834 aa22.45■■□□□ 1.18
TRIM64FP-201ENST00000427305 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
TRIM64FP-201ENST00000427305 ADRA2BP18089 450 aa22.2■■□□□ 1.14
TRIM64FP-201ENST00000427305 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
TRIM64FP-201ENST00000427305 ABCC9O60706 1549 aa21.49■■□□□ 1.03
TRIM64FP-201ENST00000427305 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
TRIM64FP-201ENST00000427305 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
TRIM64FP-201ENST00000427305 NACADO15069 1562 aa20.26■□□□□ 0.83
TRIM64FP-201ENST00000427305 PPP4R3CPQ6ZMV5 832 aa20.25■□□□□ 0.83
TRIM64FP-201ENST00000427305 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
TRIM64FP-201ENST00000427305 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
TRIM64FP-201ENST00000427305 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
TRIM64FP-201ENST00000427305 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
TRIM64FP-201ENST00000427305 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
TRIM64FP-201ENST00000427305 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
TRIM64FP-201ENST00000427305 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
TRIM64FP-201ENST00000427305 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
TRIM64FP-201ENST00000427305 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
TRIM64FP-201ENST00000427305 CACNB1Q02641 598 aaPredicted RBP19.81■□□□□ 0.76
TRIM64FP-201ENST00000427305 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
TRIM64FP-201ENST00000427305 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
TRIM64FP-201ENST00000427305 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
TRIM64FP-201ENST00000427305 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
TRIM64FP-201ENST00000427305 KCNA4P22459 653 aa19.57■□□□□ 0.72
TRIM64FP-201ENST00000427305 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
TRIM64FP-201ENST00000427305 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
TRIM64FP-201ENST00000427305 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
TRIM64FP-201ENST00000427305 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
TRIM64FP-201ENST00000427305 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
TRIM64FP-201ENST00000427305 NPM3O75607 178 aaKnown RBP19.38■□□□□ 0.69
TRIM64FP-201ENST00000427305 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.69
TRIM64FP-201ENST00000427305 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.69
TRIM64FP-201ENST00000427305 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
TRIM64FP-201ENST00000427305 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
TRIM64FP-201ENST00000427305 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
TRIM64FP-201ENST00000427305 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
TRIM64FP-201ENST00000427305 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
TRIM64FP-201ENST00000427305 CUX2O14529 1486 aa18.63■□□□□ 0.57
TRIM64FP-201ENST00000427305 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
TRIM64FP-201ENST00000427305 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
TRIM64FP-201ENST00000427305 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
TRIM64FP-201ENST00000427305 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
TRIM64FP-201ENST00000427305 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
TRIM64FP-201ENST00000427305 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
TRIM64FP-201ENST00000427305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRIM64FP-201ENST00000427305 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
TRIM64FP-201ENST00000427305 NESP48681 1621 aa18.43■□□□□ 0.54
TRIM64FP-201ENST00000427305 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
TRIM64FP-201ENST00000427305 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
TRIM64FP-201ENST00000427305 SLC4A2P04920 1241 aa18.38■□□□□ 0.53
TRIM64FP-201ENST00000427305 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
TRIM64FP-201ENST00000427305 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.53
TRIM64FP-201ENST00000427305 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
TRIM64FP-201ENST00000427305 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
TRIM64FP-201ENST00000427305 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
TRIM64FP-201ENST00000427305 POTEHQ6S545 545 aa18.15■□□□□ 0.5
TRIM64FP-201ENST00000427305 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.5
TRIM64FP-201ENST00000427305 WIZO95785 1651 aa18.1■□□□□ 0.49
TRIM64FP-201ENST00000427305 WDR62O43379 1518 aa18.05■□□□□ 0.48
TRIM64FP-201ENST00000427305 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
TRIM64FP-201ENST00000427305 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
TRIM64FP-201ENST00000427305 ZBTB22O15209 634 aa18.04■□□□□ 0.48
TRIM64FP-201ENST00000427305 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
TRIM64FP-201ENST00000427305 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
TRIM64FP-201ENST00000427305 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
TRIM64FP-201ENST00000427305 CFTRP13569 1480 aa17.86■□□□□ 0.45
TRIM64FP-201ENST00000427305 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
TRIM64FP-201ENST00000427305 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
TRIM64FP-201ENST00000427305 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
TRIM64FP-201ENST00000427305 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.45
TRIM64FP-201ENST00000427305 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
TRIM64FP-201ENST00000427305 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
TRIM64FP-201ENST00000427305 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
TRIM64FP-201ENST00000427305 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
TRIM64FP-201ENST00000427305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
TRIM64FP-201ENST00000427305 CAPN15O75808 1086 aa17.7■□□□□ 0.42
TRIM64FP-201ENST00000427305 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
TRIM64FP-201ENST00000427305 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
TRIM64FP-201ENST00000427305 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
TRIM64FP-201ENST00000427305 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
TRIM64FP-201ENST00000427305 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
TRIM64FP-201ENST00000427305 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
TRIM64FP-201ENST00000427305 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
TRIM64FP-201ENST00000427305 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
TRIM64FP-201ENST00000427305 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
TRIM64FP-201ENST00000427305 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
TRIM64FP-201ENST00000427305 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
TRIM64FP-201ENST00000427305 DSG3P32926 999 aa17.55■□□□□ 0.4
TRIM64FP-201ENST00000427305 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
TRIM64FP-201ENST00000427305 APLP2Q06481 763 aa17.54■□□□□ 0.4
TRIM64FP-201ENST00000427305 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
TRIM64FP-201ENST00000427305 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms