RNA–Protein interactions for RNA: ENST00000427159.6

FTSJ3-201, Transcript of FtsJ RNA methyltransferase homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FTSJ3, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FTSJ3-201ENST00000427159 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.844e-7■■■■■ 86.2
FTSJ3-201ENST00000427159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■■■■■ 70.5
FTSJ3-201ENST00000427159 PABPC4Q13310 644 aaKnown RBP eCLIP10.53□□□□□ -0.723e-9■■■■■ 61.5
FTSJ3-201ENST00000427159 PUM1Q14671 1186 aaKnown RBP eCLIP9.09□□□□□ -0.956e-14■■■■■ 56.5
FTSJ3-201ENST00000427159 SF3B4Q15427 424 aaKnown RBP eCLIP8.69□□□□□ -1.027e-8■■■■■ 37.8
FTSJ3-201ENST00000427159 EIF3HO15372 352 aaKnown RBP eCLIP10.2□□□□□ -0.781e-7■■■■■ 33.7
FTSJ3-201ENST00000427159 SUB1P53999 127 aaKnown RBP eCLIP7.48□□□□□ -1.212e-6■■■■■ 33
FTSJ3-201ENST00000427159 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.79□□□□□ -13e-7■■■■■ 27.9
FTSJ3-201ENST00000427159 EFTUD2Q15029 972 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■■ 26.8
FTSJ3-201ENST00000427159 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.3□□□□□ -0.927e-8■■■■□ 26.2
FTSJ3-201ENST00000427159 G3BP1Q13283 466 aaKnown RBP eCLIP11.49□□□□□ -0.573e-6■■■■□ 21.7
FTSJ3-201ENST00000427159 SF3A3Q12874 501 aaKnown RBP eCLIP10.02□□□□□ -0.812e-6■■■■□ 21.6
FTSJ3-201ENST00000427159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■■■■□ 21.4
FTSJ3-201ENST00000427159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■□□ 19.1
FTSJ3-201ENST00000427159 ZNF622Q969S3 477 aaKnown RBP eCLIP10.63□□□□□ -0.712e-7■■■□□ 18.9
FTSJ3-201ENST00000427159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.34e-7■■■□□ 18.5
FTSJ3-201ENST00000427159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.72□□□□□ -0.698e-7■■■□□ 18.3
FTSJ3-201ENST00000427159 FTOQ9C0B1 505 aaKnown RBP eCLIP11.3□□□□□ -0.66e-6■■■□□ 17.7
FTSJ3-201ENST00000427159 RBM22Q9NW64 420 aaKnown RBP eCLIP9.62□□□□□ -0.875e-8■■■□□ 16.9
FTSJ3-201ENST00000427159 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■□□□ 13.9
FTSJ3-201ENST00000427159 SRSF1Q07955 248 aaKnown RBP eCLIP7.3□□□□□ -1.249e-8■■□□□ 13.7
FTSJ3-201ENST00000427159 PPIGQ13427 754 aaKnown RBP eCLIP9.09□□□□□ -0.957e-7■■□□□ 12.5
FTSJ3-201ENST00000427159 NCBP2P52298 156 aaKnown RBP eCLIP8.94□□□□□ -0.983e-6■■□□□ 12.3
FTSJ3-201ENST00000427159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.556e-6■□□□□ 10.9
FTSJ3-201ENST00000427159 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■□□□□ 10
Retrieved 25 of 25 RNA–protein pairs in 3.8 ms