RNA–Protein interactions for RNA: ENST00000427101.6

SP100-208, Transcript of SP100 nuclear antigen, humanhuman

TSL 2 BASIC

Gene SP100, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-208ENST00000427101 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
SP100-208ENST00000427101 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
SP100-208ENST00000427101 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
SP100-208ENST00000427101 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
SP100-208ENST00000427101 ABCC9O60706 1549 aa34.23■■■■□ 3.07
SP100-208ENST00000427101 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
SP100-208ENST00000427101 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
SP100-208ENST00000427101 MYO15BQ96JP2 1530 aa33.7■■■□□ 2.99
SP100-208ENST00000427101 NACADO15069 1562 aa33.56■■■□□ 2.96
SP100-208ENST00000427101 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
SP100-208ENST00000427101 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
SP100-208ENST00000427101 UNC13AQ9UPW8 1703 aa32.78■■■□□ 2.84
SP100-208ENST00000427101 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.78
SP100-208ENST00000427101 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.78
SP100-208ENST00000427101 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.76
SP100-208ENST00000427101 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.75
SP100-208ENST00000427101 RSF1Q96T23 1441 aaPredicted RBP32.07■■■□□ 2.72
SP100-208ENST00000427101 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
SP100-208ENST00000427101 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
SP100-208ENST00000427101 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
SP100-208ENST00000427101 WIZO95785 1651 aa31.74■■■□□ 2.67
SP100-208ENST00000427101 EIF4G1Q04637 1599 aaKnown RBP31.38■■■□□ 2.61
SP100-208ENST00000427101 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
SP100-208ENST00000427101 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
SP100-208ENST00000427101 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
SP100-208ENST00000427101 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
SP100-208ENST00000427101 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
SP100-208ENST00000427101 CCDC88BA6NC98 1476 aa31.05■■■□□ 2.56
SP100-208ENST00000427101 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
SP100-208ENST00000427101 NCAPD3P42695 1498 aa31■■■□□ 2.55
SP100-208ENST00000427101 CC2D2AQ9P2K1 1620 aa30.96■■■□□ 2.55
SP100-208ENST00000427101 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
SP100-208ENST00000427101 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
SP100-208ENST00000427101 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
SP100-208ENST00000427101 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
SP100-208ENST00000427101 CFTRP13569 1480 aa30.31■■■□□ 2.44
SP100-208ENST00000427101 CADPSQ9ULU8 1353 aa30.22■■■□□ 2.43
SP100-208ENST00000427101 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
SP100-208ENST00000427101 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
SP100-208ENST00000427101 SYNJ1O43426 1573 aa30.09■■■□□ 2.41
SP100-208ENST00000427101 NESP48681 1621 aa30.07■■■□□ 2.4
SP100-208ENST00000427101 FAM9AQ8IZU1 332 aaPredicted RBP29.98■■■□□ 2.39
SP100-208ENST00000427101 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.38
SP100-208ENST00000427101 TOP2BQ02880 1626 aa29.92■■■□□ 2.38
SP100-208ENST00000427101 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.38
SP100-208ENST00000427101 CUX1P39880 1505 aa29.89■■■□□ 2.38
SP100-208ENST00000427101 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
SP100-208ENST00000427101 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
SP100-208ENST00000427101 SOGA1O94964 1423 aa29.83■■■□□ 2.37
SP100-208ENST00000427101 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.35
SP100-208ENST00000427101 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
SP100-208ENST00000427101 CEP164Q9UPV0 1460 aa29.69■■■□□ 2.34
SP100-208ENST00000427101 KIF21AQ7Z4S6 1674 aa29.69■■■□□ 2.34
SP100-208ENST00000427101 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
SP100-208ENST00000427101 EEA1Q15075 1411 aa29.6■■■□□ 2.33
SP100-208ENST00000427101 DNMBPQ6XZF7 1577 aa29.59■■■□□ 2.33
SP100-208ENST00000427101 TOPBP1Q92547 1522 aa29.57■■■□□ 2.32
SP100-208ENST00000427101 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
SP100-208ENST00000427101 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
SP100-208ENST00000427101 CSRNP3Q8WYN3 585 aa29.55■■■□□ 2.32
SP100-208ENST00000427101 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
SP100-208ENST00000427101 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
SP100-208ENST00000427101 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
SP100-208ENST00000427101 CUX2O14529 1486 aa29.35■■■□□ 2.29
SP100-208ENST00000427101 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
SP100-208ENST00000427101 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
SP100-208ENST00000427101 KIF21BO75037 1637 aa29.29■■■□□ 2.28
SP100-208ENST00000427101 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
SP100-208ENST00000427101 GOLGA3Q08378 1498 aa29.24■■■□□ 2.27
SP100-208ENST00000427101 WDR97A6NE52 1622 aa29.21■■■□□ 2.27
SP100-208ENST00000427101 WDR62O43379 1518 aa29.21■■■□□ 2.27
SP100-208ENST00000427101 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
SP100-208ENST00000427101 PRXQ9BXM0 1461 aa29.19■■■□□ 2.26
SP100-208ENST00000427101 UBTFP17480 764 aaKnown RBP29.18■■■□□ 2.26
SP100-208ENST00000427101 IGF1RP08069 1367 aa29.18■■■□□ 2.26
SP100-208ENST00000427101 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
SP100-208ENST00000427101 TNIKQ9UKE5 1360 aa29.15■■■□□ 2.26
SP100-208ENST00000427101 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
SP100-208ENST00000427101 TDRD9Q8NDG6 1382 aaKnown RBP29.09■■■□□ 2.25
SP100-208ENST00000427101 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
SP100-208ENST00000427101 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
SP100-208ENST00000427101 CEP162Q5TB80 1403 aa29.02■■■□□ 2.24
SP100-208ENST00000427101 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
SP100-208ENST00000427101 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
SP100-208ENST00000427101 IFT140Q96RY7 1462 aa28.96■■■□□ 2.23
SP100-208ENST00000427101 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
SP100-208ENST00000427101 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
SP100-208ENST00000427101 CUL7Q14999 1698 aa28.89■■■□□ 2.22
SP100-208ENST00000427101 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
SP100-208ENST00000427101 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
SP100-208ENST00000427101 CLIP1P30622 1438 aa28.8■■■□□ 2.2
SP100-208ENST00000427101 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
SP100-208ENST00000427101 GRIN2BQ13224 1484 aa28.75■■■□□ 2.19
SP100-208ENST00000427101 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
SP100-208ENST00000427101 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
SP100-208ENST00000427101 CTTNBP2Q8WZ74 1663 aa28.62■■■□□ 2.17
SP100-208ENST00000427101 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
SP100-208ENST00000427101 ARHGAP35Q9NRY4 1499 aa28.57■■■□□ 2.16
SP100-208ENST00000427101 ARAP1Q96P48 1450 aa28.56■■■□□ 2.16
SP100-208ENST00000427101 VPS8Q8N3P4 1428 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms