RNA–Protein interactions for RNA: ENST00000427034.1

POLR2F-204, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-204ENST00000427034 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
POLR2F-204ENST00000427034 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
POLR2F-204ENST00000427034 ABCC9O60706 1549 aa28.99■■■□□ 2.23
POLR2F-204ENST00000427034 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
POLR2F-204ENST00000427034 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
POLR2F-204ENST00000427034 NACADO15069 1562 aa27.53■■■□□ 2
POLR2F-204ENST00000427034 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
POLR2F-204ENST00000427034 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
POLR2F-204ENST00000427034 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
POLR2F-204ENST00000427034 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
POLR2F-204ENST00000427034 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
POLR2F-204ENST00000427034 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
POLR2F-204ENST00000427034 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
POLR2F-204ENST00000427034 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
POLR2F-204ENST00000427034 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
POLR2F-204ENST00000427034 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
POLR2F-204ENST00000427034 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
POLR2F-204ENST00000427034 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
POLR2F-204ENST00000427034 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
POLR2F-204ENST00000427034 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
POLR2F-204ENST00000427034 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
POLR2F-204ENST00000427034 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
POLR2F-204ENST00000427034 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
POLR2F-204ENST00000427034 HMGXB3Q12766 1538 aa25.2■■□□□ 1.62
POLR2F-204ENST00000427034 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
POLR2F-204ENST00000427034 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
POLR2F-204ENST00000427034 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
POLR2F-204ENST00000427034 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
POLR2F-204ENST00000427034 CUX2O14529 1486 aa24.94■■□□□ 1.58
POLR2F-204ENST00000427034 NESP48681 1621 aa24.94■■□□□ 1.58
POLR2F-204ENST00000427034 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
POLR2F-204ENST00000427034 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
POLR2F-204ENST00000427034 WIZO95785 1651 aa24.74■■□□□ 1.55
POLR2F-204ENST00000427034 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
POLR2F-204ENST00000427034 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
POLR2F-204ENST00000427034 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
POLR2F-204ENST00000427034 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
POLR2F-204ENST00000427034 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
POLR2F-204ENST00000427034 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
POLR2F-204ENST00000427034 CFTRP13569 1480 aa24.44■■□□□ 1.5
POLR2F-204ENST00000427034 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
POLR2F-204ENST00000427034 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
POLR2F-204ENST00000427034 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
POLR2F-204ENST00000427034 WDR62O43379 1518 aa24.33■■□□□ 1.49
POLR2F-204ENST00000427034 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
POLR2F-204ENST00000427034 URB2Q14146 1524 aaKnown RBP24.13■■□□□ 1.45
POLR2F-204ENST00000427034 PRDM2Q13029 1718 aa24■■□□□ 1.43
POLR2F-204ENST00000427034 OSCARQ8IYS5 282 aa23.96■■□□□ 1.43
POLR2F-204ENST00000427034 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
POLR2F-204ENST00000427034 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
POLR2F-204ENST00000427034 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
POLR2F-204ENST00000427034 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
POLR2F-204ENST00000427034 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
POLR2F-204ENST00000427034 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
POLR2F-204ENST00000427034 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
POLR2F-204ENST00000427034 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
POLR2F-204ENST00000427034 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.38
POLR2F-204ENST00000427034 SOGA1O94964 1423 aa23.66■■□□□ 1.38
POLR2F-204ENST00000427034 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
POLR2F-204ENST00000427034 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
POLR2F-204ENST00000427034 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
POLR2F-204ENST00000427034 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
POLR2F-204ENST00000427034 FBLN2P98095 1184 aa23.57■■□□□ 1.36
POLR2F-204ENST00000427034 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
POLR2F-204ENST00000427034 CUX1P39880 1505 aa23.54■■□□□ 1.36
POLR2F-204ENST00000427034 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
POLR2F-204ENST00000427034 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
POLR2F-204ENST00000427034 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
POLR2F-204ENST00000427034 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
POLR2F-204ENST00000427034 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
POLR2F-204ENST00000427034 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
POLR2F-204ENST00000427034 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
POLR2F-204ENST00000427034 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
POLR2F-204ENST00000427034 CHD1O14646 1710 aa23.37■■□□□ 1.33
POLR2F-204ENST00000427034 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
POLR2F-204ENST00000427034 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
POLR2F-204ENST00000427034 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
POLR2F-204ENST00000427034 ABCA10Q8WWZ4 1543 aa23.32■■□□□ 1.32
POLR2F-204ENST00000427034 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
POLR2F-204ENST00000427034 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
POLR2F-204ENST00000427034 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
POLR2F-204ENST00000427034 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
POLR2F-204ENST00000427034 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
POLR2F-204ENST00000427034 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
POLR2F-204ENST00000427034 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
POLR2F-204ENST00000427034 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
POLR2F-204ENST00000427034 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
POLR2F-204ENST00000427034 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
POLR2F-204ENST00000427034 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
POLR2F-204ENST00000427034 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
POLR2F-204ENST00000427034 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
POLR2F-204ENST00000427034 NUP160Q12769 1436 aa22.99■■□□□ 1.27
POLR2F-204ENST00000427034 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
POLR2F-204ENST00000427034 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
POLR2F-204ENST00000427034 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
POLR2F-204ENST00000427034 IGF1RP08069 1367 aa22.87■■□□□ 1.25
POLR2F-204ENST00000427034 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
POLR2F-204ENST00000427034 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
POLR2F-204ENST00000427034 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
POLR2F-204ENST00000427034 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms