RNA–Protein interactions for RNA: ENST00000426387.1

AP003385.1-201, humanhuman

BASIC

Gene AP003385.1, Length 893 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003385.1-201ENST00000426387 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
AP003385.1-201ENST00000426387 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
AP003385.1-201ENST00000426387 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
AP003385.1-201ENST00000426387 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
AP003385.1-201ENST00000426387 FOXD1Q16676 465 aa19.15■□□□□ 0.66
AP003385.1-201ENST00000426387 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
AP003385.1-201ENST00000426387 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
AP003385.1-201ENST00000426387 ADRA2BP18089 450 aa17.98■□□□□ 0.47
AP003385.1-201ENST00000426387 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
AP003385.1-201ENST00000426387 MSH5O43196 834 aa17.85■□□□□ 0.45
AP003385.1-201ENST00000426387 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
AP003385.1-201ENST00000426387 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
AP003385.1-201ENST00000426387 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
AP003385.1-201ENST00000426387 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
AP003385.1-201ENST00000426387 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
AP003385.1-201ENST00000426387 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
AP003385.1-201ENST00000426387 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
AP003385.1-201ENST00000426387 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
AP003385.1-201ENST00000426387 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
AP003385.1-201ENST00000426387 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
AP003385.1-201ENST00000426387 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
AP003385.1-201ENST00000426387 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
AP003385.1-201ENST00000426387 ABCC9O60706 1549 aa15.43■□□□□ 0.06
AP003385.1-201ENST00000426387 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
AP003385.1-201ENST00000426387 KCNA4P22459 653 aa15.32■□□□□ 0.04
AP003385.1-201ENST00000426387 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
AP003385.1-201ENST00000426387 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
AP003385.1-201ENST00000426387 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
AP003385.1-201ENST00000426387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
AP003385.1-201ENST00000426387 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
AP003385.1-201ENST00000426387 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
AP003385.1-201ENST00000426387 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
AP003385.1-201ENST00000426387 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
AP003385.1-201ENST00000426387 NACADO15069 1562 aa14.6□□□□□ -0.07
AP003385.1-201ENST00000426387 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
AP003385.1-201ENST00000426387 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
AP003385.1-201ENST00000426387 CAPN15O75808 1086 aa14.46□□□□□ -0.09
AP003385.1-201ENST00000426387 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
AP003385.1-201ENST00000426387 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
AP003385.1-201ENST00000426387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
AP003385.1-201ENST00000426387 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
AP003385.1-201ENST00000426387 APLP2Q06481 763 aa14.37□□□□□ -0.11
AP003385.1-201ENST00000426387 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
AP003385.1-201ENST00000426387 DSG3P32926 999 aa14.34□□□□□ -0.11
AP003385.1-201ENST00000426387 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
AP003385.1-201ENST00000426387 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
AP003385.1-201ENST00000426387 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
AP003385.1-201ENST00000426387 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
AP003385.1-201ENST00000426387 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
AP003385.1-201ENST00000426387 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
AP003385.1-201ENST00000426387 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
AP003385.1-201ENST00000426387 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
AP003385.1-201ENST00000426387 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
AP003385.1-201ENST00000426387 ABCB7O75027 752 aa14.14□□□□□ -0.15
AP003385.1-201ENST00000426387 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
AP003385.1-201ENST00000426387 ZBTB22O15209 634 aa14.09□□□□□ -0.15
AP003385.1-201ENST00000426387 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
AP003385.1-201ENST00000426387 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
AP003385.1-201ENST00000426387 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
AP003385.1-201ENST00000426387 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
AP003385.1-201ENST00000426387 POLA2Q14181 598 aa13.92□□□□□ -0.18
AP003385.1-201ENST00000426387 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
AP003385.1-201ENST00000426387 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
AP003385.1-201ENST00000426387 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
AP003385.1-201ENST00000426387 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
AP003385.1-201ENST00000426387 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
AP003385.1-201ENST00000426387 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
AP003385.1-201ENST00000426387 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
AP003385.1-201ENST00000426387 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
AP003385.1-201ENST00000426387 POTEHQ6S545 545 aa13.46□□□□□ -0.25
AP003385.1-201ENST00000426387 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
AP003385.1-201ENST00000426387 FBLN2P98095 1184 aa13.4□□□□□ -0.26
AP003385.1-201ENST00000426387 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
AP003385.1-201ENST00000426387 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
AP003385.1-201ENST00000426387 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
AP003385.1-201ENST00000426387 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
AP003385.1-201ENST00000426387 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
AP003385.1-201ENST00000426387 CUX2O14529 1486 aa13.36□□□□□ -0.27
AP003385.1-201ENST00000426387 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
AP003385.1-201ENST00000426387 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
AP003385.1-201ENST00000426387 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
AP003385.1-201ENST00000426387 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
AP003385.1-201ENST00000426387 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
AP003385.1-201ENST00000426387 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
AP003385.1-201ENST00000426387 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
AP003385.1-201ENST00000426387 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
AP003385.1-201ENST00000426387 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
AP003385.1-201ENST00000426387 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
AP003385.1-201ENST00000426387 NESP48681 1621 aa13.24□□□□□ -0.29
AP003385.1-201ENST00000426387 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
AP003385.1-201ENST00000426387 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
AP003385.1-201ENST00000426387 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
AP003385.1-201ENST00000426387 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
AP003385.1-201ENST00000426387 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
AP003385.1-201ENST00000426387 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
AP003385.1-201ENST00000426387 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
AP003385.1-201ENST00000426387 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
AP003385.1-201ENST00000426387 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
AP003385.1-201ENST00000426387 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
AP003385.1-201ENST00000426387 WIZO95785 1651 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms