RNA–Protein interactions for RNA: ENST00000426137.1

CDC7-202, Transcript of cell division cycle 7, humanhuman

TSL 5

Gene CDC7, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-202ENST00000426137 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
CDC7-202ENST00000426137 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
CDC7-202ENST00000426137 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
CDC7-202ENST00000426137 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
CDC7-202ENST00000426137 FOXD1Q16676 465 aa14.28□□□□□ -0.12
CDC7-202ENST00000426137 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
CDC7-202ENST00000426137 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
CDC7-202ENST00000426137 MSH5O43196 834 aa13.47□□□□□ -0.25
CDC7-202ENST00000426137 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
CDC7-202ENST00000426137 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
CDC7-202ENST00000426137 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
CDC7-202ENST00000426137 ADRA2BP18089 450 aa13.08□□□□□ -0.32
CDC7-202ENST00000426137 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
CDC7-202ENST00000426137 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
CDC7-202ENST00000426137 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
CDC7-202ENST00000426137 ABCC9O60706 1549 aa12.09□□□□□ -0.47
CDC7-202ENST00000426137 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
CDC7-202ENST00000426137 NACADO15069 1562 aa11.73□□□□□ -0.53
CDC7-202ENST00000426137 RB1CC1Q8TDY2 1594 aa11.72□□□□□ -0.53
CDC7-202ENST00000426137 MYO15BQ96JP2 1530 aa11.72□□□□□ -0.53
CDC7-202ENST00000426137 ZCCHC6Q5VYS8 1495 aaKnown RBP11.72□□□□□ -0.53
CDC7-202ENST00000426137 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
CDC7-202ENST00000426137 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
CDC7-202ENST00000426137 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
CDC7-202ENST00000426137 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
CDC7-202ENST00000426137 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
CDC7-202ENST00000426137 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
CDC7-202ENST00000426137 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
CDC7-202ENST00000426137 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
CDC7-202ENST00000426137 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
CDC7-202ENST00000426137 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
CDC7-202ENST00000426137 SCRIBQ14160 1630 aa11.34□□□□□ -0.59
CDC7-202ENST00000426137 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
CDC7-202ENST00000426137 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
CDC7-202ENST00000426137 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC7-202ENST00000426137 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
CDC7-202ENST00000426137 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
CDC7-202ENST00000426137 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
CDC7-202ENST00000426137 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
CDC7-202ENST00000426137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDC7-202ENST00000426137 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
CDC7-202ENST00000426137 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
CDC7-202ENST00000426137 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
CDC7-202ENST00000426137 SMARCA4P51532 1647 aa10.88□□□□□ -0.67
CDC7-202ENST00000426137 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
CDC7-202ENST00000426137 SMARCA2P51531 1590 aa10.84□□□□□ -0.67
CDC7-202ENST00000426137 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
CDC7-202ENST00000426137 PEG3Q9GZU2 1588 aa10.81□□□□□ -0.68
CDC7-202ENST00000426137 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
CDC7-202ENST00000426137 MROH2BQ7Z745 1585 aa10.8□□□□□ -0.68
CDC7-202ENST00000426137 HMGXB3Q12766 1538 aa10.78□□□□□ -0.68
CDC7-202ENST00000426137 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
CDC7-202ENST00000426137 BAZ1BQ9UIG0 1483 aaKnown RBP10.73□□□□□ -0.69
CDC7-202ENST00000426137 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
CDC7-202ENST00000426137 WIZO95785 1651 aa10.67□□□□□ -0.7
CDC7-202ENST00000426137 DSG3P32926 999 aa10.65□□□□□ -0.7
CDC7-202ENST00000426137 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
CDC7-202ENST00000426137 CAPN15O75808 1086 aa10.62□□□□□ -0.71
CDC7-202ENST00000426137 TOP2AP11388 1531 aaKnown RBP10.61□□□□□ -0.71
CDC7-202ENST00000426137 POTEHQ6S545 545 aa10.59□□□□□ -0.71
CDC7-202ENST00000426137 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
CDC7-202ENST00000426137 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
CDC7-202ENST00000426137 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
CDC7-202ENST00000426137 NESP48681 1621 aa10.47□□□□□ -0.73
CDC7-202ENST00000426137 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
CDC7-202ENST00000426137 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
CDC7-202ENST00000426137 CFTRP13569 1480 aa10.45□□□□□ -0.74
CDC7-202ENST00000426137 ERCC6Q03468 1493 aa10.45□□□□□ -0.74
CDC7-202ENST00000426137 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
CDC7-202ENST00000426137 KCNA4P22459 653 aa10.44□□□□□ -0.74
CDC7-202ENST00000426137 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
CDC7-202ENST00000426137 APLP2Q06481 763 aa10.38□□□□□ -0.75
CDC7-202ENST00000426137 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
CDC7-202ENST00000426137 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
CDC7-202ENST00000426137 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
CDC7-202ENST00000426137 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
CDC7-202ENST00000426137 CUX2O14529 1486 aa10.36□□□□□ -0.75
CDC7-202ENST00000426137 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
CDC7-202ENST00000426137 ABCB7O75027 752 aa10.35□□□□□ -0.75
CDC7-202ENST00000426137 THOC2Q8NI27 1593 aaKnown RBP10.33□□□□□ -0.76
CDC7-202ENST00000426137 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
CDC7-202ENST00000426137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
CDC7-202ENST00000426137 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
CDC7-202ENST00000426137 WDR62O43379 1518 aa10.29□□□□□ -0.76
CDC7-202ENST00000426137 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
CDC7-202ENST00000426137 SAMD1Q6SPF0 538 aaPredicted RBP10.25□□□□□ -0.77
CDC7-202ENST00000426137 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
CDC7-202ENST00000426137 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
CDC7-202ENST00000426137 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
CDC7-202ENST00000426137 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
CDC7-202ENST00000426137 IFT140Q96RY7 1462 aa10.15□□□□□ -0.78
CDC7-202ENST00000426137 CUX1P39880 1505 aa10.13□□□□□ -0.79
CDC7-202ENST00000426137 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
CDC7-202ENST00000426137 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
CDC7-202ENST00000426137 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
CDC7-202ENST00000426137 TOP2BQ02880 1626 aa10.09□□□□□ -0.79
CDC7-202ENST00000426137 SOGA1O94964 1423 aa10.08□□□□□ -0.8
CDC7-202ENST00000426137 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
CDC7-202ENST00000426137 BIVM-ERCC5R4GMW8 1640 aa10.08□□□□□ -0.8
CDC7-202ENST00000426137 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms