RNA–Protein interactions for RNA: ENST00000425032.7

USP8-204, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2 BASIC

Gene USP8, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-204ENST00000425032 NISCHQ9Y2I1 1504 aa12.02□□□□□ -0.49
USP8-204ENST00000425032 ABCC9O60706 1549 aa10.98□□□□□ -0.65
USP8-204ENST00000425032 CCDC180Q9P1Z9 1646 aa10.72□□□□□ -0.69
USP8-204ENST00000425032 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.74
USP8-204ENST00000425032 DNAJC5BQ9UF47 199 aa10.36□□□□□ -0.75
USP8-204ENST00000425032 RB1CC1Q8TDY2 1594 aa10.32□□□□□ -0.76
USP8-204ENST00000425032 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP8-204ENST00000425032 NACADO15069 1562 aa10.21□□□□□ -0.78
USP8-204ENST00000425032 UNC13AQ9UPW8 1703 aa10.01□□□□□ -0.81
USP8-204ENST00000425032 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
USP8-204ENST00000425032 MYO15BQ96JP2 1530 aa9.98□□□□□ -0.81
USP8-204ENST00000425032 ZCCHC6Q5VYS8 1495 aaKnown RBP9.92□□□□□ -0.82
USP8-204ENST00000425032 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
USP8-204ENST00000425032 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
USP8-204ENST00000425032 DCAF1Q9Y4B6 1507 aa9.85□□□□□ -0.83
USP8-204ENST00000425032 CC2D2AQ9P2K1 1620 aa9.82□□□□□ -0.84
USP8-204ENST00000425032 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
USP8-204ENST00000425032 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
USP8-204ENST00000425032 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
USP8-204ENST00000425032 ERCC6Q03468 1493 aa9.5□□□□□ -0.89
USP8-204ENST00000425032 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
USP8-204ENST00000425032 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
USP8-204ENST00000425032 CUX2O14529 1486 aa9.39□□□□□ -0.91
USP8-204ENST00000425032 NESP48681 1621 aa9.39□□□□□ -0.91
USP8-204ENST00000425032 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
USP8-204ENST00000425032 SMARCA4P51532 1647 aa9.37□□□□□ -0.91
USP8-204ENST00000425032 BAZ1BQ9UIG0 1483 aaKnown RBP9.37□□□□□ -0.91
USP8-204ENST00000425032 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
USP8-204ENST00000425032 HMGXB3Q12766 1538 aa9.33□□□□□ -0.92
USP8-204ENST00000425032 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
USP8-204ENST00000425032 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
USP8-204ENST00000425032 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
USP8-204ENST00000425032 LAMC3Q9Y6N6 1575 aa9.23□□□□□ -0.93
USP8-204ENST00000425032 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
USP8-204ENST00000425032 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.93
USP8-204ENST00000425032 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
USP8-204ENST00000425032 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
USP8-204ENST00000425032 WIZO95785 1651 aa9.16□□□□□ -0.94
USP8-204ENST00000425032 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
USP8-204ENST00000425032 CEP164Q9UPV0 1460 aa9.12□□□□□ -0.95
USP8-204ENST00000425032 FANCD2Q9BXW9 1451 aa9.1□□□□□ -0.95
USP8-204ENST00000425032 RSF1Q96T23 1441 aaPredicted RBP9.08□□□□□ -0.96
USP8-204ENST00000425032 OSCARQ8IYS5 282 aa9.08□□□□□ -0.96
USP8-204ENST00000425032 WDR62O43379 1518 aa9.07□□□□□ -0.96
USP8-204ENST00000425032 CFTRP13569 1480 aa9.05□□□□□ -0.96
USP8-204ENST00000425032 TOP2AP11388 1531 aaKnown RBP9.01□□□□□ -0.97
USP8-204ENST00000425032 URB2Q14146 1524 aaKnown RBP9□□□□□ -0.97
USP8-204ENST00000425032 FBLN2P98095 1184 aa8.97□□□□□ -0.97
USP8-204ENST00000425032 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.97
USP8-204ENST00000425032 ZNF608Q9ULD9 1512 aaPredicted RBP8.94□□□□□ -0.98
USP8-204ENST00000425032 CYB5RLQ6IPT4 315 aa8.93□□□□□ -0.98
USP8-204ENST00000425032 IFT140Q96RY7 1462 aa8.92□□□□□ -0.98
USP8-204ENST00000425032 TOPBP1Q92547 1522 aa8.9□□□□□ -0.98
USP8-204ENST00000425032 TRHP20396 242 aaPredicted RBP8.89□□□□□ -0.99
USP8-204ENST00000425032 AQRO60306 1485 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■■■□□ 16
USP8-204ENST00000425032 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
USP8-204ENST00000425032 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
USP8-204ENST00000425032 RIMBP3CA6NJZ7 1639 aa8.85□□□□□ -0.99
USP8-204ENST00000425032 RIMBP3BA6NNM3 1639 aa8.85□□□□□ -0.99
USP8-204ENST00000425032 RIMBP3Q9UFD9 1639 aa8.85□□□□□ -0.99
USP8-204ENST00000425032 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
USP8-204ENST00000425032 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
USP8-204ENST00000425032 PRDM2Q13029 1718 aa8.84□□□□□ -0.99
USP8-204ENST00000425032 DNMBPQ6XZF7 1577 aa8.83□□□□□ -1
USP8-204ENST00000425032 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
USP8-204ENST00000425032 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
USP8-204ENST00000425032 EIF4G3O43432 1585 aaKnown RBP8.83□□□□□ -1
USP8-204ENST00000425032 SOGA1O94964 1423 aa8.82□□□□□ -1
USP8-204ENST00000425032 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
USP8-204ENST00000425032 TARBP1Q13395 1621 aaKnown RBP8.77□□□□□ -1.01
USP8-204ENST00000425032 CHD1O14646 1710 aa8.77□□□□□ -1.01
USP8-204ENST00000425032 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
USP8-204ENST00000425032 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
USP8-204ENST00000425032 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
USP8-204ENST00000425032 CUX1P39880 1505 aa8.72□□□□□ -1.01
USP8-204ENST00000425032 GRIN2BQ13224 1484 aa8.72□□□□□ -1.01
USP8-204ENST00000425032 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
USP8-204ENST00000425032 MAGI1Q96QZ7 1491 aaPredicted RBP8.69□□□□□ -1.02
USP8-204ENST00000425032 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
USP8-204ENST00000425032 AEBP2Q6ZN18 517 aaPredicted RBP8.68□□□□□ -1.02
USP8-204ENST00000425032 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
USP8-204ENST00000425032 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
USP8-204ENST00000425032 WRNQ14191 1432 aaPredicted RBP eCLIP8.63□□□□□ -1.03
USP8-204ENST00000425032 WDR97A6NE52 1622 aa8.62□□□□□ -1.03
USP8-204ENST00000425032 ABCA10Q8WWZ4 1543 aa8.62□□□□□ -1.03
USP8-204ENST00000425032 PBRM1Q86U86 1689 aa8.6□□□□□ -1.03
USP8-204ENST00000425032 GRIN2AQ12879 1464 aa8.59□□□□□ -1.03
USP8-204ENST00000425032 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
USP8-204ENST00000425032 JPH4Q96JJ6 628 aa8.57□□□□□ -1.04
USP8-204ENST00000425032 TTBK1Q5TCY1 1321 aaPredicted RBP8.57□□□□□ -1.04
USP8-204ENST00000425032 ERCC6L2Q5T890 1561 aa8.57□□□□□ -1.04
USP8-204ENST00000425032 ABCA5Q8WWZ7 1642 aa8.57□□□□□ -1.04
USP8-204ENST00000425032 FHAD1B1AJZ9 1412 aa8.56□□□□□ -1.04
USP8-204ENST00000425032 NPM1P06748 294 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP8-204ENST00000425032 NUP160Q12769 1436 aa8.54□□□□□ -1.04
USP8-204ENST00000425032 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
USP8-204ENST00000425032 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
USP8-204ENST00000425032 TOP2BQ02880 1626 aa8.53□□□□□ -1.04
USP8-204ENST00000425032 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
USP8-204ENST00000425032 FAM69CQ0P6D2 419 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms