RNA–Protein interactions for RNA: ENST00000424848.2

CDK6-202, Transcript of cyclin dependent kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK6, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-202ENST00000424848 SF3B1O75533 1304 aaKnown RBP eCLIP22.19■■□□□ 1.142e-6■■■■■ 144.7
CDK6-202ENST00000424848 PTBP1P26599 531 aaKnown RBP eCLIP16.37■□□□□ 0.215e-7■■■■■ 88.5
CDK6-202ENST00000424848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.9■■□□□ 1.13e-6■■■■■ 87.6
CDK6-202ENST00000424848 FMR1Q06787 632 aaKnown RBP eCLIP24.83■■□□□ 1.562e-8■■■■■ 81.9
CDK6-202ENST00000424848 HNRNPLP14866 589 aaKnown RBP eCLIP21.08■□□□□ 0.977e-14■■■■■ 46
CDK6-202ENST00000424848 XRCC6P12956 609 aaKnown RBP eCLIP22.93■■□□□ 1.262e-42■■■■■ 42.2
CDK6-202ENST00000424848 EIF4G2P78344 907 aaKnown RBP eCLIP28.79■■■□□ 2.26e-9■■■■■ 37.6
CDK6-202ENST00000424848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.23■□□□□ 0.354e-7■■■■■ 34.9
CDK6-202ENST00000424848 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.28■□□□□ 0.847e-8■■■■■ 33.7
CDK6-202ENST00000424848 HNRNPMP52272 730 aaKnown RBP eCLIP31.67■■■□□ 2.661e-9■■■■■ 32.5
CDK6-202ENST00000424848 TARDBPQ13148 414 aaKnown RBP eCLIP19.94■□□□□ 0.787e-7■■■■■ 32.2
CDK6-202ENST00000424848 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19■□□□□ 0.635e-7■■■■■ 29.5
CDK6-202ENST00000424848 PCBP2Q15366 365 aaKnown RBP eCLIP19.61■□□□□ 0.731e-6■■■■□ 26.4
CDK6-202ENST00000424848 DKC1O60832 514 aaKnown RBP eCLIP23.06■■□□□ 1.283e-20■■■■□ 26.3
CDK6-202ENST00000424848 PRPF4O43172 522 aaKnown RBP eCLIP19.52■□□□□ 0.721e-6■■■■□ 26.1
CDK6-202ENST00000424848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.62■■□□□ 1.216e-8■■■■□ 24.3
CDK6-202ENST00000424848 AQRO60306 1485 aaKnown RBP eCLIP35.07■■■■□ 3.216e-7■■■■□ 24
CDK6-202ENST00000424848 TIAL1Q01085 375 aaKnown RBP eCLIP19.93■□□□□ 0.789e-7■■■■□ 23.8
CDK6-202ENST00000424848 CSTF2P33240 577 aaKnown RBP eCLIP19.86■□□□□ 0.775e-7■■■■□ 23.3
CDK6-202ENST00000424848 HNRNPKP61978 463 aaKnown RBP eCLIP20.38■□□□□ 0.859e-7■■■■□ 22.4
CDK6-202ENST00000424848 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.71■□□□□ 0.753e-6■■■■□ 22.2
CDK6-202ENST00000424848 MATR3P43243 847 aaKnown RBP eCLIP22.43■■□□□ 1.185e-7■■■■□ 22
CDK6-202ENST00000424848 QKIQ96PU8 341 aaKnown RBP eCLIP20.74■□□□□ 0.917e-8■■■■□ 21.6
CDK6-202ENST00000424848 RBFOX2O43251 390 aaKnown RBP eCLIP16.22■□□□□ 0.191e-5■■■■□ 20.3
CDK6-202ENST00000424848 ILF3Q12906 894 aaKnown RBP eCLIP20.27■□□□□ 0.842e-10■■■■□ 20
CDK6-202ENST00000424848 EFTUD2Q15029 972 aaKnown RBP eCLIP19.9■□□□□ 0.782e-6■■■■□ 19.6
CDK6-202ENST00000424848 DDX3XO00571 662 aaKnown RBP eCLIP21.39■■□□□ 1.012e-14■■■□□ 18.1
CDK6-202ENST00000424848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.58■■□□□ 1.052e-6■■■□□ 18
CDK6-202ENST00000424848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.079e-8■■■□□ 17.7
CDK6-202ENST00000424848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.56■■□□□ 1.522e-6■■■□□ 17.1
CDK6-202ENST00000424848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.33■■■□□ 2.133e-7■■■□□ 16.6
CDK6-202ENST00000424848 RPS3P23396 243 aaKnown RBP eCLIP20.13■□□□□ 0.815e-11■■■□□ 16.6
CDK6-202ENST00000424848 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.12■□□□□ 0.652e-9■■■□□ 15.1
CDK6-202ENST00000424848 HNRNPCP07910 306 aaKnown RBP eCLIP15.46■□□□□ 0.064e-7■■□□□ 14.4
CDK6-202ENST00000424848 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.891e-6■■□□□ 14.2
CDK6-202ENST00000424848 SRSF1Q07955 248 aaKnown RBP eCLIP18.48■□□□□ 0.555e-7■■□□□ 13.8
CDK6-202ENST00000424848 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.73■□□□□ 0.591e-14■■□□□ 13.5
CDK6-202ENST00000424848 EIF3GO75821 320 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■□□□ 13.4
CDK6-202ENST00000424848 U2AF2P26368 475 aaKnown RBP eCLIP23.25■■□□□ 1.312e-7■■□□□ 13
CDK6-202ENST00000424848 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.79■■□□□ 1.246e-11■■□□□ 13
CDK6-202ENST00000424848 KHSRPQ92945 711 aaKnown RBP eCLIP21.52■■□□□ 1.033e-6■■□□□ 12.7
CDK6-202ENST00000424848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.997e-7■■□□□ 11.8
CDK6-202ENST00000424848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.36■■■□□ 2.779e-8■■□□□ 11.8
CDK6-202ENST00000424848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.37■■■□□ 2.615e-9■■□□□ 11.7
CDK6-202ENST00000424848 CDC40O60508 579 aaKnown RBP eCLIP18.68■□□□□ 0.588e-8■■□□□ 11.7
CDK6-202ENST00000424848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.521e-8■■□□□ 11.7
CDK6-202ENST00000424848 PPIGQ13427 754 aaKnown RBP eCLIP22.92■■□□□ 1.263e-8■□□□□ 11.2
CDK6-202ENST00000424848 PCBP1Q15365 356 aaKnown RBP eCLIP22.7■■□□□ 1.224e-6■□□□□ 10.4
CDK6-202ENST00000424848 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.9■□□□□ 0.468e-6■□□□□ 10.3
CDK6-202ENST00000424848 SFPQP23246 707 aaKnown RBP eCLIP22.7■■□□□ 1.224e-7■□□□□ 10.3
CDK6-202ENST00000424848 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.87■■□□□ 1.572e-7■□□□□ 10.3
CDK6-202ENST00000424848 PUM1Q14671 1186 aaKnown RBP eCLIP20.37■□□□□ 0.852e-7■□□□□ 10.1
CDK6-202ENST00000424848 SF3A3Q12874 501 aaKnown RBP eCLIP18.85■□□□□ 0.617e-10■□□□□ 10.1
CDK6-202ENST00000424848 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.67■□□□□ 0.586e-8■□□□□ 10
CDK6-202ENST00000424848 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.6■■□□□ 1.378e-6■□□□□ 9
CDK6-202ENST00000424848 G3BP1Q13283 466 aaKnown RBP eCLIP25.42■■□□□ 1.669e-9■□□□□ 8.4
CDK6-202ENST00000424848 YBX3P16989 372 aaKnown RBP eCLIP25.97■■□□□ 1.751e-12■□□□□ 8.4
CDK6-202ENST00000424848 GTF2F1P35269 517 aaKnown RBP eCLIP22.03■■□□□ 1.121e-6■□□□□ 8.3
CDK6-202ENST00000424848 EIF3HO15372 352 aaKnown RBP eCLIP20.19■□□□□ 0.821e-13■□□□□ 8.1
CDK6-202ENST00000424848 HNRNPUQ00839 825 aaKnown RBP eCLIP26.51■■□□□ 1.839e-6■□□□□ 8.1
Retrieved 60 of 60 RNA–protein pairs in 11 ms