RNA–Protein interactions for RNA: ENST00000424843.6

LRP12-202, Transcript of LDL receptor related protein 12, humanhuman

TSL 2 BASIC

Gene LRP12, Length 4,092 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-202ENST00000424843 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
LRP12-202ENST00000424843 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
LRP12-202ENST00000424843 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
LRP12-202ENST00000424843 ABCC9O60706 1549 aa22.92■■□□□ 1.26
LRP12-202ENST00000424843 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
LRP12-202ENST00000424843 NACADO15069 1562 aa22.17■■□□□ 1.14
LRP12-202ENST00000424843 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
LRP12-202ENST00000424843 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
LRP12-202ENST00000424843 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
LRP12-202ENST00000424843 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
LRP12-202ENST00000424843 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
LRP12-202ENST00000424843 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
LRP12-202ENST00000424843 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
LRP12-202ENST00000424843 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
LRP12-202ENST00000424843 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
LRP12-202ENST00000424843 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
LRP12-202ENST00000424843 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
LRP12-202ENST00000424843 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
LRP12-202ENST00000424843 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
LRP12-202ENST00000424843 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
LRP12-202ENST00000424843 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
LRP12-202ENST00000424843 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
LRP12-202ENST00000424843 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
LRP12-202ENST00000424843 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
LRP12-202ENST00000424843 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
LRP12-202ENST00000424843 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
LRP12-202ENST00000424843 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
LRP12-202ENST00000424843 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
LRP12-202ENST00000424843 WIZO95785 1651 aa20.29■□□□□ 0.84
LRP12-202ENST00000424843 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
LRP12-202ENST00000424843 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
LRP12-202ENST00000424843 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
LRP12-202ENST00000424843 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
LRP12-202ENST00000424843 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
LRP12-202ENST00000424843 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
LRP12-202ENST00000424843 TRIM41Q8WV44 630 aa19.89■□□□□ 0.78
LRP12-202ENST00000424843 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
LRP12-202ENST00000424843 CFTRP13569 1480 aa19.82■□□□□ 0.76
LRP12-202ENST00000424843 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
LRP12-202ENST00000424843 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
LRP12-202ENST00000424843 NESP48681 1621 aa19.74■□□□□ 0.75
LRP12-202ENST00000424843 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
LRP12-202ENST00000424843 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
LRP12-202ENST00000424843 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.73
LRP12-202ENST00000424843 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
LRP12-202ENST00000424843 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
LRP12-202ENST00000424843 SOGA1O94964 1423 aa19.43■□□□□ 0.7
LRP12-202ENST00000424843 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
LRP12-202ENST00000424843 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
LRP12-202ENST00000424843 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
LRP12-202ENST00000424843 FBLN2P98095 1184 aa19.34■□□□□ 0.69
LRP12-202ENST00000424843 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
LRP12-202ENST00000424843 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
LRP12-202ENST00000424843 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
LRP12-202ENST00000424843 CUX2O14529 1486 aa19.32■□□□□ 0.68
LRP12-202ENST00000424843 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
LRP12-202ENST00000424843 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
LRP12-202ENST00000424843 CUX1P39880 1505 aa19.26■□□□□ 0.67
LRP12-202ENST00000424843 EEA1Q15075 1411 aa19.26■□□□□ 0.67
LRP12-202ENST00000424843 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
LRP12-202ENST00000424843 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
LRP12-202ENST00000424843 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
LRP12-202ENST00000424843 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
LRP12-202ENST00000424843 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
LRP12-202ENST00000424843 WDR62O43379 1518 aa19.25■□□□□ 0.67
LRP12-202ENST00000424843 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
LRP12-202ENST00000424843 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
LRP12-202ENST00000424843 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
LRP12-202ENST00000424843 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
LRP12-202ENST00000424843 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
LRP12-202ENST00000424843 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
LRP12-202ENST00000424843 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
LRP12-202ENST00000424843 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
LRP12-202ENST00000424843 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
LRP12-202ENST00000424843 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.65
LRP12-202ENST00000424843 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
LRP12-202ENST00000424843 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
LRP12-202ENST00000424843 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
LRP12-202ENST00000424843 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
LRP12-202ENST00000424843 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.62
LRP12-202ENST00000424843 IGF1RP08069 1367 aa18.95■□□□□ 0.62
LRP12-202ENST00000424843 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
LRP12-202ENST00000424843 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
LRP12-202ENST00000424843 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
LRP12-202ENST00000424843 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
LRP12-202ENST00000424843 APLP2Q06481 763 aa18.9■□□□□ 0.62
LRP12-202ENST00000424843 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.62
LRP12-202ENST00000424843 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
LRP12-202ENST00000424843 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
LRP12-202ENST00000424843 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
LRP12-202ENST00000424843 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
LRP12-202ENST00000424843 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
LRP12-202ENST00000424843 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.61
LRP12-202ENST00000424843 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
LRP12-202ENST00000424843 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
LRP12-202ENST00000424843 CUL7Q14999 1698 aa18.78■□□□□ 0.6
LRP12-202ENST00000424843 CARMIL2Q6F5E8 1435 aa18.76■□□□□ 0.59
LRP12-202ENST00000424843 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
LRP12-202ENST00000424843 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
LRP12-202ENST00000424843 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms